Factsheet for PGSC0003DMT400041215

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g019440.2.1	Tomato	plastid	97.5	98.07
VIT_18s0001g12840.t01	Wine grape	plastid	77.54	77.1
CDY41275	Canola	cytosol	47.22	76.4
KRH61137	Soybean	plastid	76.01	74.72
KRH51829	Soybean	plastid	75.82	74.39
CDX84911	Canola	plastid	70.44	71.96
Bra032842.1-P	Field mustard	plastid	71.21	71.76
CDY27626	Canola	plastid	71.21	71.76
AT1G27680.1	Thale cress	plastid	70.83	71.24
GSMUA_Achr4P02930_001	Banana	mitochondrion	60.84	69.37
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	60.46	68.18
GSMUA_Achr9P06920_001	Banana	cytosol	67.75	68.02
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	68.33	67.94
PGSC0003DMT400001935	Potato	plastid	64.88	67.6
KRH15167	Soybean	mitochondrion, plastid	66.22	65.97
KRH05853	Soybean	plastid	66.03	65.65
Os05t0580000-01	Rice	plastid	62.19	62.43
HORVU1Hr1G091600.9	Barley	plastid	62.0	61.52
PGSC0003DMT400023304	Potato	cytosol, plastid	60.65	61.36
TraesCS1B01G449700.2	Wheat	plastid	62.0	61.17
Zm00001d039131_P007	Maize	plastid	62.76	58.6
OQU87201	Sorghum	plastid	56.05	56.48
Os01t0633100-01	Rice	plastid	55.66	55.98
TraesCS1A01G419600.2	Wheat	plastid	57.97	55.82
TraesCS1D01G427400.2	Wheat	plastid	57.97	55.82
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	48.37	48.37
PGSC0003DMT400097320	Potato	plastid	48.18	48.36
OQU78492	Sorghum	plastid	62.0	47.57
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	54.51	43.16
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	10.94	41.91
PGSC0003DMT400064936	Potato	cytosol	12.09	40.38

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	EntrezGene:102600909	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	ProteinID:CAA52917	ProteinID:CAA52917.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009501	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	InterPro:IPR029044	UniProt:M1BB30	InterPro:NTP_transferase_dom
InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	EnsemblPlantsGene:PGSC0003DMG400015952	PGSC:PGSC0003DMG400015952	EnsemblPlants:PGSC0003DMT400041215	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF5	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000295DD32	EMBL:X74982	RefSeq:XP_015163910.1	SEG:seg

Description

Glucose-1-phosphate adenylyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400015952]

Coordinates

chr7:-:21364990..21370714

Molecular Weight (calculated)

57633.3 Da

IEP (calculated)

7.391

GRAVY (calculated)

-0.144

Length

521 amino acids

Sequence
(BLAST)

001: MDALCASMKG TAQLVAICNQ ESAFWGEKIS GRRLINKGFG VRSCKSFTTQ QRGRNVTSAV LTRDINKEML PFEESMFEEQ PTADPKAVAS VILGGGVGTR
101: LFPLTSRRAK PAVPIGGCYR LIDVPMSNCI NSGIRKIFIL TQFNSFSLNR HLARTYNFGN GVGFGDGFVE VLAATQTPGD AGKMWFQGTA DAVRQFIWVF
201: ENQKNKNVEH IIILSGDHLY RMNYMDFVQK HIDTNADITV SCVPMDDGRA SDFGLMKIDE TGRIIQFAEK PKGPALKAMQ VDTSILGLSE QEASNFPYIA
301: SMGVYVFKTD VLLNLLKSAY PSCNDFGSEI IPSAVKDHNV QAYLFNDYWE DIGTVKSFFD ANLALTKQPP KFDFNDPKTP FYTSARFLPP TKVDKSRIVD
401: AIISHGCFLR ECNIQHSIVG VRSRLDYGVE FKDTMMMGAD YYQTESEIAS LLAEGKVPIG VGPNTKIQNC IIDKNAKIGK DVVILNKEGV EEADRSAEGF
501: YIRSGITVIM KNATIKDGTV I

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.