Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g015670.2.1 | Tomato | plastid | 97.44 | 32.76 |
| GSMUA_Achr3P21710_001 | Banana | plastid | 55.13 | 22.22 |
| VIT_05s0094g01500.t01 | Wine grape | plastid | 66.03 | 21.64 |
| AT1G05610.2 | Thale cress | plastid | 56.41 | 18.26 |
| CDY10130 | Canola | plastid | 56.41 | 18.26 |
| CDY47264 | Canola | plastid | 55.77 | 18.05 |
| Bra015444.1-P | Field mustard | plastid | 55.13 | 17.84 |
| PGSC0003DMT400079823 | Potato | cytosol, extracellular, plastid | 50.0 | 14.97 |
| PGSC0003DMT400097320 | Potato | plastid | 47.44 | 14.26 |
| PGSC0003DMT400001935 | Potato | plastid | 40.38 | 12.6 |
| PGSC0003DMT400023304 | Potato | cytosol, plastid | 40.38 | 12.23 |
| PGSC0003DMT400041215 | Potato | plastid | 40.38 | 12.09 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400064936 | EnsemblPlantsGene:PGSC0003DMG400025218 | Gene3D:2.160.10.10 | InterPro:Trimer_LpxA-like_sf | PANTHER:PTHR43523 | PANTHER:PTHR43523:SF3 |
| PGSC:PGSC0003DMG400025218 | SUPFAM:SSF51161 | UniParc:UPI000294C089 | UniProt:M1CD49 | MapMan:50.2.7 | : |
Description
Glucose-1-phosphate adenylyltransferase [Source:PGSC_GENE;Acc:PGSC0003DMG400025218]
Coordinates
chr8:+:8179470..8180658
Molecular Weight (calculated)
16947.6 Da
IEP (calculated)
8.041
GRAVY (calculated)
-0.190
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MESIKNTKKA YSLYDKDSPL YTLPRHLPPT QITDAAITDS VIGDGCFLNR CKIRGTVVGM KTRVGDGAII EDSVIMGSDT YQSGRTEEDI HIPIGIGEGS
101: QIKKAIIDKN VRIGKNVKIL NKENVQECNN EANGYIITKG IVVIMKGAII PDGSIL
101: QIKKAIIDKN VRIGKNVKIL NKENVQECNN EANGYIITKG IVVIMKGAII PDGSIL
001: MQISSSSFIT KFTNLHMVRS TSDHHQWRHN YNLKQLFIPN LSVSNSQHLP LNQSVAAIVF GGGSDSELYP LTKTRSKGAI PIAANYRLID AVISNCINSG
101: ITKIYAITQF NSTSLNSHLS KAYSGFGLGK DRFVEVIAAY QSLEDQGWFQ GTADAIRRCL WVFEEFPVTE FLVLPGHHLY KMDYKMLIED HRRSRADITI
201: VGLSSVTDHD FGFGFMEVDS TNAVTRFTIK GQQDLISVAN RTATRSDGTS SCSVPSAGIY VIGREQMVKL LRECLIKSKD LASEIIPGAI SEGMKVKAHM
301: FDGYWEDVRS IGAYYRANME SIKSYRFYDR QCPLYTMPRC LPPSSMSVAV ITNSIIGDGC ILDKCVIRGS VVGMRTRIAD EVIVEDSIIV GSDIYEMEED
401: VRRKGKEKKI EIRIGIGEKS RIRRAIVDKN ARIGKNVMII NRDNVEEGNR EAQGYVIREG IIIILRNAVI PNDSIL
101: ITKIYAITQF NSTSLNSHLS KAYSGFGLGK DRFVEVIAAY QSLEDQGWFQ GTADAIRRCL WVFEEFPVTE FLVLPGHHLY KMDYKMLIED HRRSRADITI
201: VGLSSVTDHD FGFGFMEVDS TNAVTRFTIK GQQDLISVAN RTATRSDGTS SCSVPSAGIY VIGREQMVKL LRECLIKSKD LASEIIPGAI SEGMKVKAHM
301: FDGYWEDVRS IGAYYRANME SIKSYRFYDR QCPLYTMPRC LPPSSMSVAV ITNSIIGDGC ILDKCVIRGS VVGMRTRIAD EVIVEDSIIV GSDIYEMEED
401: VRRKGKEKKI EIRIGIGEKS RIRRAIVDKN ARIGKNVMII NRDNVEEGNR EAQGYVIREG IIIILRNAVI PNDSIL
Arabidopsis Description
APS2ADP-glucose pyrophosphorylase small subunit 2 [Source:TAIR;Acc:AT1G05610]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.