Factsheet for TraesCS1B01G449700.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G091600.9	Barley	plastid	98.11	98.67
Os05t0580000-01	Rice	plastid	89.58	91.14
TraesCS1A01G419600.2	Wheat	plastid	93.18	90.94
TraesCS1D01G427400.2	Wheat	plastid	92.99	90.76
Zm00001d039131_P007	Maize	plastid	87.69	82.97
CDY41275	Canola	cytosol	42.42	69.57
OQU78492	Sorghum	plastid	89.02	69.22
GSMUA_Achr4P02930_001	Banana	mitochondrion	58.52	67.61
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	58.9	67.32
GSMUA_Achr9P06920_001	Banana	cytosol	65.53	66.67
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	64.77	65.27
VIT_18s0001g12840.t01	Wine grape	plastid	63.26	63.74
KRH51516	Soybean	plastid	62.12	63.2
KRH60824	Soybean	plastid	62.12	63.2
KRH61137	Soybean	plastid	62.5	62.26
PGSC0003DMT400041215	Potato	plastid	61.17	62.0
KRH24456	Soybean	plastid	61.93	61.93
CDY27626	Canola	plastid	60.42	61.7
Bra032842.1-P	Field mustard	plastid	60.42	61.7
KRH29435	Soybean	cytosol	61.93	61.7
Solyc01g109790.2.1	Tomato	extracellular	61.17	61.64
PGSC0003DMT400001935	Potato	plastid	58.14	61.4
KRH51829	Soybean	plastid	61.74	61.39
Solyc07g019440.2.1	Tomato	plastid	60.23	61.39
VIT_03s0038g04570.t01	Wine grape	cytosol	61.17	61.29
CDX84911	Canola	plastid	59.09	61.18
AT1G27680.1	Thale cress	plastid	59.28	60.42
Bra033604.1-P	Field mustard	cytosol, plastid	59.85	60.42
AT4G39210.1	Thale cress	plastid	59.28	60.08
AT2G21590.4	Thale cress	plastid	58.71	59.27
KRH15167	Soybean	mitochondrion, plastid	57.95	58.51
KRH05853	Soybean	plastid	57.95	58.4
CDY15884	Canola	cytosol, plastid	57.39	58.27
Bra030291.1-P	Field mustard	cytosol, plastid	57.39	58.27
CDX99581	Canola	cytosol, plastid	57.58	57.9
TraesCS5B01G484700.1	Wheat	plastid	51.7	54.38
CDY56761	Canola	endoplasmic reticulum	59.85	53.11
CDX72711	Canola	cytosol	59.66	49.84
TraesCS5B01G175800.1	Wheat	plastid	42.05	44.31
TraesCS7B01G183300.1	Wheat	plastid	41.86	43.0
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	10.04	38.97

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	EnsemblPlantsGene:TraesCS1B01G449700	EnsemblPlants:TraesCS1B01G449700.2	InterPro:Trimer_LpxA-like_sf	TIGR:cd02508	TIGR:cd04651

Description

No Description!

Coordinates

chr1B:-:668129122..668132472

Molecular Weight (calculated)

58529.8 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.230

Length

528 amino acids

Sequence
(BLAST)

001: MSSMQFSSVL PLEGKACVSP VRREGSACER LKVGDSSSIR HDRASRRMCN GGRGPAATGA QCVLTSDASP ADTLVLRTSF RRNYADPNEV AAVILGGGTG
101: TQLFPLTSTR ATPAVPIGGC YRLIDIPMSN CFNSGINKIF VMTQFNSASL NRHIHRTYLG GGINFTDGSV EVLAATQMPG EAAGWFRGTA DAVRKFIWVL
201: EDYYKNKSIE HILILSGDQL YRMDYMELVQ KHVDDNADIT LSCAPVGESR ASEYGLVKFD SSGRVVQFSE KPKGDDLEAM KVDTSFLNFA IDDPAKYPYI
301: ASMGVYVFKR DVLLNLLKSR YAELHDFGSE ILPRALHDHN VQAYVFTDYW EDIGTIRSFF DANMALCEQV PLSFWPPKFE FYDPKTPFFT SPRYLPPTKS
401: DKCRIKEAII SHGCFLRECK IEHSIIGVRS RLNSGSELKN AMMMGADSYE TEDEISRLMS EGKVPIGVGE NTKISNCIID MNARIGRDVV ISNKEGVQEA
501: DRPEEGYYIR SGIVVIQKNA TIKDGTVV

Best Arabidopsis Sequence Match ( AT4G39210.1 )
(BLAST)

001: MDSCCNFSLG TKTVLAKDSF KNVENKFLGE KIKGSVLKPF SSDLSSKKFR NRKLRPGVAY AIATSKNAKE ALKNQPSMFE RRRADPKNVA AIILGGGDGA
101: KLFPLTKRAA TPAVPVGGCY RMIDIPMSNC INSCINKIFV LTQFNSASLN RHLARTYFGN GINFGDGFVE VLAATQTPGE AGKKWFQGTA DAVRKFLWVF
201: EDAKNRNIEN IIILSGDHLY RMNYMDFVQH HVDSKADITL SCAPVDESRA SEYGLVNIDR SGRVVHFSEK PTGIDLKSMQ TDTTMHGLSH QEAAKSPYIA
301: SMGVYCFKTE ALLKLLTWRY PSSNDFGSEI IPAAIKDHNV QGYIYRDYWE DIGTIKSFYE ANIALVEEHP KFEFYDQNTP FYTSPRFLPP TKTEKCRIVN
401: SVISHGCFLG ECSIQRSIIG ERSRLDYGVE LQDTLMLGAD SYQTESEIAS LLAEGNVPIG IGRDTKIRKC IIDKNAKIGK NVVIMNKDDV KEADRPEEGF
501: YIRSGITVVV EKATIKDGTV I

Arabidopsis Description

APL3Glucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178US50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.