CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61137	Soybean	plastid	95.29	95.47
CDY41275	Canola	cytosol	48.96	80.75
VIT_18s0001g12840.t01	Wine grape	plastid	78.72	79.77
PGSC0003DMT400041215	Potato	plastid	74.39	75.82
CDX84911	Canola	plastid	72.5	75.49
Solyc07g019440.2.1	Tomato	plastid	73.26	75.1
Bra032842.1-P	Field mustard	plastid	72.5	74.47
CDY27626	Canola	plastid	72.5	74.47
KRH15167	Soybean	mitochondrion, plastid	73.07	74.19
KRH05853	Soybean	plastid	72.69	73.66
AT1G27680.1	Thale cress	plastid	71.56	73.36
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	62.71	72.08
GSMUA_Achr4P02930_001	Banana	mitochondrion	61.96	71.99
KRH24456	Soybean	plastid	71.19	71.59
GSMUA_Achr9P06920_001	Banana	cytosol	69.68	71.29
KRH60824	Soybean	plastid	69.49	71.1
KRH51516	Soybean	plastid	69.3	70.91
KRH29435	Soybean	cytosol	70.06	70.19
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	69.11	70.04
Os05t0580000-01	Rice	plastid	62.15	63.58
KRG96634	Soybean	plastid	62.34	62.57
HORVU1Hr1G091600.9	Barley	plastid	61.39	62.1
TraesCS1B01G449700.2	Wheat	plastid	61.39	61.74
KRH68365	Soybean	plastid	61.02	61.25
Zm00001d039131_P007	Maize	plastid	63.28	60.22
KRH51050	Soybean	nucleus, plastid	58.95	60.19
KRH02097	Soybean	nucleus, plastid	59.13	60.04
Os01t0633100-01	Rice	plastid	58.19	59.65
OQU87201	Sorghum	plastid	56.31	57.83
TraesCS1A01G419600.2	Wheat	plastid	57.82	56.75
TraesCS1D01G427400.2	Wheat	plastid	57.82	56.75
KRH14152	Soybean	plastid	31.26	51.71
KRH73984	Soybean	nucleus, plastid	49.34	50.87
KRH14151	Soybean	cytosol	17.51	50.82
OQU78492	Sorghum	plastid	62.9	49.19
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	54.43	43.92
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	11.11	43.38

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	EntrezGene:100789920	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10
UniProt:A0A0R0JH94	EMBL:ACUP02003393	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:GLYMA_06G030400	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987
GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	InterPro:IPR029044	EnsemblPlants:KRH51829	ProteinID:KRH51829
ProteinID:KRH51829.1	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809
ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF5	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000170AD44	:	:	:

Description

hypothetical protein

Coordinates

chr6:+:2390673..2396324

Molecular Weight (calculated)

58771.4 Da

IEP (calculated)

8.330

GRAVY (calculated)

-0.229

Length

531 amino acids

Sequence
(BLAST)

001: MDSACATLNG RHLAKVSEGI GRNRTSGFWG ESTRGSVNTK RFLSVQSCKT SRTNRNLRNS KPGSGIARAV LTSDIDEDSM AFQGVPTFEK PEVDPKSVAS
101: IILGGGAGTR LFPLTGRRAK PAVPIGGCYR LIDIPMSNCI NSGIRKIFIL TQFNSFSLNR HLSRAYSFGN GMTFGDGFVE VLAATQTPGE AGKKWFQGTA
201: DAVRQFIWVF EDAKNKNVEH ILILSGDHLY RMDYMDFVQR HVDTNADITV SCVPMDDSRA SDYGLMKIDK TGRIIQFAEK PKGSDLKAMR VDTTLLGLLP
301: QEAEKHPYIA SMGVYVFRTE TLLQLLRWKC SSCNDFGSEI IPSAVNEHNV QAYLFNDYWE DIGTIKSFFD ANLALTEQPP KFEFYDPKTP FFTSPRFLPP
401: TKVEKCKIVD AIISHGCFLR ECSVQHSIVG VRSRLESGVE LQDTMMMGAD YYQTEYEIAS LVAEGKVPIG VGANTKIRNC IIDKNAKIGR NVIIANTDGV
501: QEADRAKEGF YIRSGITVTL KNATIKDGTV I

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.