CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0633100-01	Rice	plastid	77.18	77.03
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	89.94	70.67
CDY41275	Canola	cytosol	39.46	63.35
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	55.9	62.55
GSMUA_Achr4P02930_001	Banana	mitochondrion	54.74	61.93
GSMUA_Achr9P06920_001	Banana	cytosol	60.54	60.31
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	59.96	59.16
VIT_18s0001g12840.t01	Wine grape	plastid	57.83	57.06
KRH61137	Soybean	plastid	58.41	56.98
KRH24456	Soybean	plastid	58.03	56.82
KRH51516	Soybean	plastid	56.87	56.65
CDX84911	Canola	plastid	55.71	56.47
KRH60824	Soybean	plastid	56.67	56.45
KRH29435	Soybean	cytosol	57.83	56.42
VIT_03s0038g04570.t01	Wine grape	cytosol	57.45	56.36
KRH51829	Soybean	plastid	57.83	56.31
Bra032842.1-P	Field mustard	plastid	56.29	56.29
CDY27626	Canola	plastid	56.29	56.29
PGSC0003DMT400041215	Potato	plastid	56.48	56.05
AT1G27680.1	Thale cress	plastid	56.09	55.98
Solyc07g019440.2.1	Tomato	plastid	55.9	55.79
Solyc01g109790.2.1	Tomato	extracellular	56.48	55.73
Bra033604.1-P	Field mustard	cytosol, plastid	56.29	55.64
PGSC0003DMT400001935	Potato	plastid	53.58	55.4
CDY15884	Canola	cytosol, plastid	55.32	55.0
OQU78492	Sorghum	plastid	71.95	54.79
AT4G39210.1	Thale cress	plastid	54.93	54.51
Bra030291.1-P	Field mustard	cytosol, plastid	54.74	54.42
OQU88760	Sorghum	plastid	53.97	54.39
AT2G21590.4	Thale cress	plastid	54.93	54.3
CDX99581	Canola	cytosol, plastid	54.74	53.9
KRH15167	Soybean	mitochondrion, plastid	52.8	52.2
KRH05853	Soybean	plastid	52.61	51.91
EER90919	Sorghum	plastid	47.97	48.92
CDY56761	Canola	endoplasmic reticulum	56.29	48.91
CDX72711	Canola	cytosol	55.13	45.09
EER98661	Sorghum	plastid	43.13	43.73
KXG24924	Sorghum	plastid	42.55	42.55
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	9.28	35.29

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	EntrezGene:8054925
ProteinID:AAB94012.1	ProteinID:ABK97507.1	ProteinID:ABK97524.1	ProteinID:ABK97527.1	ProteinID:ABK97529.1	ProteinID:ABK97530.1
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829
GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878
GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0010170	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	UniProt:O48877
ProteinID:OQU87200.1	EnsemblPlants:OQU87201	ProteinID:OQU87201	ProteinID:OQU87201.1	ProteinID:OQU87202.1	PFAM:PF00483
ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF1	MetaCyc:PWY-622
EnsemblPlantsGene:SORBI_3003G230500	SUPFAM:SSF51161	SUPFAM:SSF53448	unigene:Sbi.9944	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf
UniParc:UPI00000AA029	RefSeq:XP_002456012.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:57000120..57007815

Molecular Weight (calculated)

57100.1 Da

IEP (calculated)

6.061

GRAVY (calculated)

-0.202

Length

517 amino acids

Sequence
(BLAST)

001: MQFSLASDAN SGPHPIRRSC EGGGIDRLER LSIGGSKQEK ALRNRCFGGR VAATTQCILT SDACPETLHF QTQSSRKSYA DANHVSAIIL GGGTGSQLFP
101: LTSTRATPAV PVGGCYRLID IPMSNCFNSG INKIFVMTQF NSTSLNRHIH RTYLGGEINF ADGSVQVLAD TQMPEEPDGW FQGTADSVRK FIWVLEDYYN
201: HKSIEHIVIL SGDQLYQMNY MELVQKHVED NADITVSCAP VDESRASNNG LVKCDHTGRV LQFFEKPKGA DLNSMRVDTN FLSYAIGDAQ KYQYIASMGI
301: YVFKKDALLD LLKSKYTQLH DFGSEILPRA VLEHNVQTCI FMGYWEDVGT IKSFFDANLA LTEQPSKFDF YDPKTPFFTA PRYLPPTQLD KCKIKDASIS
401: DGCLLRECSI EHSVIGVCSR VSYGCELKDC VMMGADIYET EEEASKLLLA GEVPVGIGGN TKIRNCIIDI NARIGKNVVI TNSKGIQEAD HPEEGYYIKS
501: GIVVILKNAT IKDGSVI

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.