CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032842.1-P	Field mustard	plastid	99.07	61.7
CDY27626	Canola	plastid	99.07	61.7
CDX84911	Canola	plastid	96.27	60.78
AT1G27680.1	Thale cress	plastid	93.79	58.3
VIT_18s0001g12840.t01	Wine grape	plastid	81.06	49.81
KRH61137	Soybean	plastid	81.06	49.25
KRH51829	Soybean	plastid	80.75	48.96
GSMUA_Achr4P02930_001	Banana	mitochondrion	68.01	47.92
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	68.63	47.84
PGSC0003DMT400041215	Potato	plastid	76.4	47.22
Solyc07g019440.2.1	Tomato	plastid	75.78	47.1
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	18.94	44.85
KRH15167	Soybean	mitochondrion, plastid	72.67	44.74
GSMUA_Achr9P06920_001	Banana	cytosol	71.74	44.51
KRH05853	Soybean	plastid	71.74	44.08
Os05t0580000-01	Rice	plastid	70.5	43.74
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	70.81	43.51
CDX92546	Canola	plastid	69.25	43.22
CDY68209	Canola	plastid	68.94	43.02
CDY02573	Canola	plastid	68.94	43.02
HORVU1Hr1G091600.9	Barley	plastid	69.25	42.48
TraesCS1B01G449700.2	Wheat	plastid	69.57	42.42
CDY15884	Canola	cytosol, plastid	68.32	42.31
CDX99581	Canola	cytosol, plastid	68.63	42.1
CDY47206	Canola	plastid	68.94	41.04
Zm00001d039131_P007	Maize	plastid	70.5	40.68
Os01t0633100-01	Rice	plastid	65.22	40.54
OQU87201	Sorghum	plastid	63.35	39.46
TraesCS1D01G427400.2	Wheat	plastid	63.66	37.89
TraesCS1A01G419600.2	Wheat	plastid	63.66	37.89
CDY56761	Canola	endoplasmic reticulum	69.88	37.82
CDX72711	Canola	cytosol	69.57	35.44
CDY68655	Canola	plastid	53.11	33.46
CDX86314	Canola	plastid	53.11	33.33
OQU78492	Sorghum	plastid	69.25	32.84
CDY27884	Canola	plastid	50.93	31.54
CDY00843	Canola	plastid	50.93	31.54
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	62.42	30.55
CDY10130	Canola	plastid	35.4	23.65
CDY47264	Canola	plastid	34.78	23.24

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078HRP0
UniProt:A0A078HRP0	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDY41275	ProteinID:CDY41275	ProteinID:CDY41275.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	EnsemblPlantsGene:GSBRNA2T00072702001
InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00810	PANTHER:PTHR43523
PANTHER:PTHR43523:SF5	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164
UniParc:UPI0004EDF782	:	:	:	:	:

Description

BnaA01g12640DBnaA01g12640D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRP0]

Coordinates

chrLK032494:-:186885..188485

Molecular Weight (calculated)

35821.9 Da

IEP (calculated)

4.751

GRAVY (calculated)

-0.158

Length

322 amino acids

Sequence
(BLAST)

001: MQDAKTKNVE HVLILSGDHL YRMDYMNFVQ KHIESNADIT VSCLPMDESR ASDYGLLKID ESGQIVQFSE KPKGDDLKAM QVDTTVLGLP PKEAAELPYI
101: ASMGVYVFRK EVLLNLLRSS YPTSNDFGSE IIPLAVKEHN VQAFLFNDYW EDIGTIGSFF DANLALTEQP PKFQFYDPKT PFFTSPRFLP PTKVDKCRIL
201: DSIVSHGCFL RECSVQHSIV GIRSRVESGV ELQDTMMMGA DFYQTEAEIA SLLAEGKVPI GVGENTKIRN CIIDKNAKIG KNVVIANADG VEEGDRPEEG
301: VYIRSGITVV LKNATIRDGL VL

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.