CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86314	Canola	plastid	97.46	97.08
KRH14151	Soybean	cytosol	33.46	93.44
AT5G48300.1	Thale cress	plastid	91.98	90.38
Solyc12g011120.1.1	Tomato	plastid	75.54	87.33
VIT_12s0057g01480.t01	Wine grape	plastid	86.89	87.23
KRH73984	Soybean	nucleus, plastid	87.28	86.6
Solyc07g056140.2.1	Tomato	plastid	87.48	85.8
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	87.28	85.6
CDY00843	Canola	plastid	86.89	85.38
CDY27884	Canola	plastid	86.89	85.38
TraesCS7D01G284900.1	Wheat	plastid	83.95	83.46
TraesCS7B01G183300.1	Wheat	plastid	83.95	83.46
TraesCS7A01G287400.2	Wheat	golgi, plastid	83.37	83.2
HORVU7Hr1G067620.2	Barley	plastid	83.56	83.07
KRH14152	Soybean	plastid	52.05	82.87
Os08t0345800-02	Rice	plastid	82.97	82.49
GSMUA_Achr1P09400_001	Banana	plastid	83.56	81.33
Zm00001d032385_P001	Maize	plastid	82.19	81.24
KXG24924	Sorghum	plastid	82.19	81.24
PGSC0003DMT400097320	Potato	plastid	82.39	81.12
Os09t0298200-01	Rice	plastid	79.26	81.0
TraesCS5B01G175800.1	Wheat	plastid	78.67	80.24
Zm00001d005546_P002	Maize	plastid	80.04	80.2
TraesCS5D01G182600.1	Wheat	plastid	78.47	80.04
EER98661	Sorghum	plastid	79.45	79.61
Zm00001d050032_P003	Maize	plastid	81.21	78.9
Zm00001d023256_P001	Maize	cytosol	15.07	76.24
Zm00001d025723_P001	Maize	cytosol	45.21	54.35
CDY41275	Canola	cytosol	33.46	53.11
CDX92546	Canola	plastid	50.68	50.19
CDY68209	Canola	plastid	50.49	50.0
CDX84911	Canola	plastid	49.9	50.0
CDY27626	Canola	plastid	50.29	49.71
CDY02573	Canola	plastid	49.9	49.42
CDY47206	Canola	plastid	49.71	46.95
CDY15884	Canola	cytosol, plastid	47.55	46.73
CDX99581	Canola	cytosol, plastid	47.75	46.48
CDY10130	Canola	plastid	41.1	43.57
CDY47264	Canola	plastid	40.9	43.36
CDY56761	Canola	endoplasmic reticulum	47.36	40.67
CDX72711	Canola	cytosol	46.77	37.82
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	7.63	28.68

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078JQC0
UniProt:A0A078JQC0	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDY68655	ProteinID:CDY68655	ProteinID:CDY68655.1
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536
GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252	EnsemblPlantsGene:GSBRNA2T00076549001	InterPro:IPR029044
InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810
PANTHER:PTHR43523	PANTHER:PTHR43523:SF9	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448	TIGRFAMs:TIGR02091
InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164	UniParc:UPI0004EE02B4	:	:	:

Description

BnaCnng59960DGlucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A078JQC0]

Coordinates

chrLK037736:+:57..2665

Molecular Weight (calculated)

56142.3 Da

IEP (calculated)

6.721

GRAVY (calculated)

-0.178

Length

511 amino acids

Sequence
(BLAST)

001: MASIAATGVL KVPPAAASCE AVPTRPLSFR SSVSLSDEWR HRRESVVSRG RMRNPMIVSP KAVSDSQNSQ TCLDPDASRS VLGIILGGGA GTRLYPLTKK
101: RAKPAVPLGA NYRLIDIPVS NCLNSNINKI YVLTQFNSAS LNRHLSRAYA TNMGGYKNEG FVEVLAAQQS PENPNWFQGT ADAVRQYLWL FEEHNVLEYL
201: ILAGDHLYRM DYEKFIQAHR ETDADITVAA LPMDEERATA FGLMKIDEEG RIVEFAEKPK GEQLKAMKVD TTILGLDDKR AKEMPYIASM GIYVVSKDVM
301: LELLRNKFPG ANDFGSEVIP GATSLGLRVQ AYLYDGYWED IGTIEAFYNA NLGITKKPVP DFSFYDRSAP IYTQPRYLPP SKMLDADVTD SVIGEGCVIK
401: NCKIHHSVVG LRSCISEGAI IEDSLLMGAD YYETASEKSL LAAKGSVPIG IGKNSHIKRA IIDKNARIGD NVKIINSDNV QEAARETEGY FIKSGIVTVI
501: KDALIPTGTL I

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.