Factsheet for Zm00001d023256_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d025723_P001	Maize	cytosol	96.04	22.82
KRH14152	Soybean	plastid	69.31	21.81
Solyc12g011120.1.1	Tomato	plastid	74.26	16.97
Zm00001d050032_P003	Maize	plastid	86.14	16.54
KXG24924	Sorghum	plastid	84.16	16.44
Zm00001d032385_P001	Maize	plastid	83.17	16.25
Os08t0345800-02	Rice	plastid	82.18	16.15
TraesCS7D01G284900.1	Wheat	plastid	81.19	15.95
TraesCS7B01G183300.1	Wheat	plastid	81.19	15.95
TraesCS7A01G287400.2	Wheat	golgi, plastid	80.2	15.82
HORVU7Hr1G067620.2	Barley	plastid	80.2	15.76
VIT_12s0057g01480.t01	Wine grape	plastid	79.21	15.72
KRH73984	Soybean	nucleus, plastid	77.23	15.15
Zm00001d005546_P002	Maize	plastid	76.24	15.1
CDY68655	Canola	plastid	76.24	15.07
Bra037495.1-P	Field mustard	plastid	76.24	15.04
CDX86314	Canola	plastid	76.24	15.01
Bra015135.1-P	Field mustard	plastid	76.24	14.81
CDY27884	Canola	plastid	76.24	14.81
CDY00843	Canola	plastid	76.24	14.81
Solyc07g056140.2.1	Tomato	plastid	76.24	14.78
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	76.24	14.78
PGSC0003DMT400097320	Potato	plastid	75.25	14.64
AT5G48300.1	Thale cress	plastid	75.25	14.62
GSMUA_Achr1P09400_001	Banana	plastid	75.25	14.48
Zm00001d010157_P001	Maize	plastid	51.49	12.84
Zm00001d033910_P002	Maize	plastid	54.46	10.5
Zm00001d019266_P002	Maize	plastid	48.51	9.48
Zm00001d039131_P007	Maize	plastid	45.54	8.24
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	45.54	6.99
KRH14151	Soybean	cytosol	2.97	1.64

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:3.90.550.10	MapMan:50.2.7	UniProt:A0A1D6IQZ6	InterPro:ADP_Glu_pyroP_CS
ProteinID:AQK38718.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091
GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00810
PANTHER:PTHR43523	PANTHER:PTHR43523:SF9	SUPFAM:SSF53448	UniParc:UPI000842B27E	EnsemblPlantsGene:Zm00001d023256	EnsemblPlants:Zm00001d023256_P001
EnsemblPlants:Zm00001d023256_T001	:	:	:	:	:

Description

Glucose-1-phosphate adenylyltransferase small subunit chloroplastic

Coordinates

chr10:-:1485867..1486172

Molecular Weight (calculated)

11425.8 Da

IEP (calculated)

4.468

GRAVY (calculated)

-0.341

Length

101 amino acids

Sequence
(BLAST)

001: MAEKRATAFG LMKIDEEGRI IEFAEKTKGE QFTEMMVDTT ILSLDDVRAK EMPYIASMGI YVFSKDAMLQ LLREQFPEAN DFGSEVIPGA RQNPKETARV
101: T

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.