Factsheet for Zm00001d050032_P003

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24924	Sorghum	plastid	93.35	94.97
Zm00001d032385_P001	Maize	plastid	92.59	94.2
TraesCS7D01G284900.1	Wheat	plastid	87.45	89.49
TraesCS7B01G183300.1	Wheat	plastid	87.45	89.49
TraesCS7A01G287400.2	Wheat	golgi, plastid	86.88	89.26
HORVU7Hr1G067620.2	Barley	plastid	87.07	89.11
Os08t0345800-02	Rice	plastid	86.31	88.33
KRH14151	Soybean	cytosol	30.61	87.98
Zm00001d023256_P001	Maize	cytosol	16.54	86.14
Solyc12g011120.1.1	Tomato	plastid	71.1	84.62
KRH73984	Soybean	nucleus, plastid	80.42	82.14
VIT_12s0057g01480.t01	Wine grape	plastid	78.9	81.53
Zm00001d005546_P002	Maize	plastid	78.9	81.37
CDY68655	Canola	plastid	78.9	81.21
CDY00843	Canola	plastid	80.23	81.15
CDY27884	Canola	plastid	80.04	80.96
Bra015135.1-P	Field mustard	plastid	80.04	80.96
CDX86314	Canola	plastid	78.9	80.9
Bra037495.1-P	Field mustard	plastid	78.52	80.66
AT5G48300.1	Thale cress	plastid	79.47	80.38
Solyc07g056140.2.1	Tomato	plastid	79.47	80.23
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	79.09	79.85
KRH14152	Soybean	plastid	47.91	78.5
GSMUA_Achr1P09400_001	Banana	plastid	78.14	78.29
PGSC0003DMT400097320	Potato	plastid	75.1	76.11
Zm00001d025723_P001	Maize	cytosol	47.53	58.82
Zm00001d010157_P001	Maize	plastid	41.25	53.58
Zm00001d033910_P002	Maize	plastid	48.1	48.28
Zm00001d019266_P002	Maize	plastid	45.63	46.42
Zm00001d039131_P007	Maize	plastid	42.4	39.96
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	40.68	32.52

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	EntrezGene:541902
UniProt:A0A1D6PZG8	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	ProteinID:AQK51816.1	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483
ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF7	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI0008433937	EnsemblPlantsGene:Zm00001d050032	EnsemblPlants:Zm00001d050032_P003
EnsemblPlants:Zm00001d050032_T003	:	:	:	:	:

Description

brittle endosperm2Glucose-1-phosphate adenylyltransferase

Coordinates

chr4:+:61315575..61321350

Molecular Weight (calculated)

57815.5 Da

IEP (calculated)

8.322

GRAVY (calculated)

-0.182

Length

526 amino acids

Sequence
(BLAST)

001: MAAIASASPR TLIPPRPRHH GAAPSPSTSD VSSLRLLRAH PRHVRRSRGV SISMPVARSR SFVFSPRAVA DSKSSQTCLD PDASTSVLGI ILGGGAGTRL
101: YPLTKKRAKP AVPLGANYRL IDIPVSNCLN SNISKIYVLT QFNSASLNRH LSRAYGSNIG GYKNEGFVEV LAAQQSPDNP NWFQGTADAV RQYLWLFEEH
201: NVMEFLILAG DHLYRMDYEK FIQAHRETNA DITVAALPMD EKRATAFGLM KIDEEGRIIE FAEKPKGEQL KAMMVDTTIL GLDDVRAKEM PYIASMGIYV
301: FSKDVMLQLL REQFPEANDF GSEVIPGATS IGKREQLTRK PRQVQAYLYD GYWEDIGTIA AFYNANLGIT KKPIPDFSFY DRFAPIYTQP RHLPPSKVLD
401: ADVTDSVIGE GCVIKNCKIN HSVVGLRSCI SEGAIIEDSL LMGADYYETE ADKKLLAEKG GIPIGIGKNS CIRRAIIDKN ARIGDNVKIL NADNVQEAAM
501: ETDGYFIKGG IVTVIKDALL PSGTVI

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.