Factsheet for TraesCS7B01G183300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

plastid: 22160430

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G284900.1	Wheat	plastid	99.61	99.61
HORVU7Hr1G067620.2	Barley	plastid	99.03	99.03
TraesCS7A01G287400.2	Wheat	golgi, plastid	98.64	99.02
KRH14151	Soybean	cytosol	32.88	92.35
Zm00001d032385_P001	Maize	plastid	91.25	90.72
KXG24924	Sorghum	plastid	91.05	90.52
Os08t0345800-02	Rice	plastid	90.08	90.08
Zm00001d050032_P003	Maize	plastid	89.49	87.45
Solyc12g011120.1.1	Tomato	plastid	74.12	86.2
CDY68655	Canola	plastid	83.46	83.95
KRH73984	Soybean	nucleus, plastid	84.05	83.88
TraesCS5B01G175800.1	Wheat	plastid	81.71	83.83
CDX86314	Canola	plastid	83.46	83.63
Bra037495.1-P	Field mustard	plastid	83.07	83.4
VIT_12s0057g01480.t01	Wine grape	plastid	82.49	83.3
Solyc07g056140.2.1	Tomato	plastid	84.05	82.92
CDY00843	Canola	plastid	83.85	82.88
Bra015135.1-P	Field mustard	plastid	83.66	82.69
CDY27884	Canola	plastid	83.66	82.69
PGSC0003DMT400079823	Potato	cytosol, extracellular, plastid	83.27	82.15
AT5G48300.1	Thale cress	plastid	82.88	81.92
Zm00001d023256_P001	Maize	cytosol	15.95	81.19
GSMUA_Achr1P09400_001	Banana	plastid	81.52	79.81
KRH14152	Soybean	plastid	49.61	79.44
PGSC0003DMT400097320	Potato	plastid	78.99	78.23
Zm00001d025723_P001	Maize	cytosol	47.08	56.94
TraesCS5B01G484700.1	Wheat	plastid	48.83	50.0
TraesCS1B01G449700.2	Wheat	plastid	43.0	41.86

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	InterPro:ADP-Glc_PPase
InterPro:ADP_Glu_pyroP_CS	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0005982	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009501	GO:GO:0009536	GO:GO:0009987
GO:GO:0016740	GO:GO:0016779	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483
ScanProsite:PS00808	ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF7	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	EnsemblPlantsGene:TraesCS7B01G183300	EnsemblPlants:TraesCS7B01G183300.1	InterPro:Trimer_LpxA-like_sf	TIGR:cd02508
TIGR:cd04651	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:290014842..290020067

Molecular Weight (calculated)

56292.6 Da

IEP (calculated)

6.848

GRAVY (calculated)

-0.148

Length

514 amino acids

Sequence
(BLAST)

001: MAMAAAASPS KILIPPHRAS AATAAASTSC DSFRLLCAPR GRRQRPRGLV ARSAPRRPFF FSPRAVSDSK SSQTCLDPDA STSVLGIILG GGAGTRLYPL
101: TKKRAKPAVP LGANYRLIDI PVSNCLNSNI SKIYVLTQFN SASLNRHLSR AYGSNIGGYK NEGFVEVLAA QQSPDNPDWF QGTADAVRQY LWLFEEHNVM
201: EYLILAGDHL YRMDYEKFIQ AHRETDADIT VAALPMDEER ATAFGLMKID EEGRIIEFAE KPKGEQLKAM MVDTTILGLD DARAKEMPYI ASMGIYVISK
301: HVMLQLLREQ FPGANDFGSE VIPGATSTGM RVQAYLYDGY WEDIGTIEAF YNANLGITKK PIPDFSFYDR SAPIYTQPRH LPPSKVLDAD VTDSVIGEGC
401: VIKNCKIHHS VVGLRSCISE GAIIEDTLLM GADYYETEAD KKLLAEKGGI PIGIGKNSHI KRAIIDKNAR IGDNVMIINV DNVQEAARET DGYFIKSGIV
501: TVIKDALLPS GTVI

Best Arabidopsis Sequence Match ( AT5G48300.1 )
(BLAST)

001: MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV RRNPIIVSPK AVSDSQNSQT CLDPDASSSV LGIILGGGAG
101: TRLYPLTKKR AKPAVPLGAN YRLIDIPVSN CLNSNISKIY VLTQFNSASL NRHLSRAYAS NMGGYKNEGF VEVLAAQQSP ENPNWFQGTA DAVRQYLWLF
201: EEHNVLEYLI LAGDHLYRMD YEKFIQAHRE TDADITVAAL PMDEQRATAF GLMKIDEEGR IIEFAEKPKG EHLKAMKVDT TILGLDDQRA KEMPFIASMG
301: IYVVSRDVML DLLRNQFPGA NDFGSEVIPG ATSLGLRVQA YLYDGYWEDI GTIEAFYNAN LGITKKPVPD FSFYDRSAPI YTQPRYLPPS KMLDADVTDS
401: VIGEGCVIKN CKIHHSVVGL RSCISEGAII EDSLLMGADY YETATEKSLL SAKGSVPIGI GKNSHIKRAI IDKNARIGDN VKIINSDNVQ EAARETDGYF
501: IKSGIVTVIK DALIPTGTVI

Arabidopsis Description

APS1Glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55228]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.