CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX92546	Canola	plastid	95.16	95.16
CDY68209	Canola	plastid	94.96	94.96
CDY47206	Canola	plastid	98.64	94.08
AT5G19220.1	Thale cress	plastid	93.99	92.91
VIT_05s0020g02880.t01	Wine grape	plastid	81.4	80.77
Solyc01g079790.2.1	Tomato	nucleus, plastid	79.84	80.0
PGSC0003DMT400023304	Potato	cytosol, plastid	79.46	79.61
KRH51050	Soybean	nucleus, plastid	78.88	78.27
KRH02097	Soybean	nucleus, plastid	78.49	77.44
TraesCS5B01G484700.1	Wheat	plastid	71.71	73.71
Os03t0735000-01	Rice	plastid	72.87	73.58
TraesCS5D01G484500.2	Wheat	plastid	71.12	72.67
EER90919	Sorghum	plastid	71.32	72.58
TraesCS5A01G472000.1	Wheat	plastid	70.74	72.28
GSMUA_Achr1P11820_001	Banana	plastid	75.39	71.64
Zm00001d033910_P002	Maize	plastid	71.12	70.04
CDY41275	Canola	cytosol	43.02	68.94
CDX84911	Canola	plastid	62.79	63.53
HORVU0Hr1G033200.1	Barley	plastid	36.24	63.39
CDY27626	Canola	plastid	62.79	62.67
HORVU1Hr1G001590.2	Barley	plastid	24.42	60.29
HORVU7Hr1G093330.2	Barley	plastid	28.1	59.18
CDY15884	Canola	cytosol, plastid	57.17	56.73
CDX99581	Canola	cytosol, plastid	57.56	56.57
CDY27884	Canola	plastid	51.16	50.77
HORVU4Hr1G025240.1	Barley	plastid	24.81	50.59
CDY00843	Canola	plastid	50.97	50.58
CDY56761	Canola	endoplasmic reticulum	57.95	50.25
CDY68655	Canola	plastid	49.42	49.9
CDX86314	Canola	plastid	49.42	49.71
CDX72711	Canola	cytosol	57.36	46.84
CDY11773	Canola	endoplasmic reticulum, plastid, vacuole	11.24	42.65
CDY10130	Canola	plastid	35.85	38.38
CDY47264	Canola	plastid	35.08	37.55

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	GO:A0A078ESP5
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlants:CDY02573	ProteinID:CDY02573	ProteinID:CDY02573.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252
EnsemblPlantsGene:GSBRNA2T00114672001	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808
ScanProsite:PS00809	ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF8	MetaCyc:PWY-622	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniPathway:UPA00164	UniParc:UPI0004EE73F0	SEG:seg

Description

BnaC02g08620D

Coordinates

chrLK031936:+:62871..65873

Molecular Weight (calculated)

56791.0 Da

IEP (calculated)

7.989

GRAVY (calculated)

-0.177

Length

516 amino acids

Sequence
(BLAST)

001: MVVSPDCRIS LSAPCCLRGS SGYTRHIKLG SFCNGELMGK KLNLAQLRSS SPNSSQKRIQ MSLNSVAGES KVQELESEKR DPKTVASIIL GGGAGTRLFP
101: LTKRRAKPAV PIGGAYRLID VPMSNCINSG INKVYILTQY NSASLNRHLA RAYNSNGVFG DGFVEALAAT QTPGETGKRW FQGTADAVRQ FHWLFEDARS
201: KEIEDVLILS GDHLYRMDYM DFIQDHRQSG ADISISCIPI DDRRASDFGL MKIDDKGRVI SFSEKPKGDD LKAMAVDTTV LGLSKEEAEK KPYIASMGVY
301: VFKKEILLNL LRWRFPTAND FGSEIIPFSA KEFYVNAYLF NDYWEDIGTI RSFFDANLAL TEHPPAFSFY DAAKPIYTSR RNLPPSKIDG SKLVDSIISH
401: GSFLTNCLIE HSIVGIRSRV GSNVQLKDTV MLGADFYETE AEVAALLAEG KVPIGIGENT KIKECIIDKN ARVGKNVVIA NSEGVQEADR SSDGFYIRSG
501: ITVILKNSVI ADGVVI

Best Arabidopsis Sequence Match ( AT5G19220.1 )
(BLAST)

001: MVVSADCRIS LSAPSCIRSS STGLTRHIKL GSFCNGELMG KKLNLSQLPN IRLRSSTNFS QKRILMSLNS VAGESKVQEL ETEKRDPRTV ASIILGGGAG
101: TRLFPLTKRR AKPAVPIGGA YRLIDVPMSN CINSGINKVY ILTQYNSASL NRHLARAYNS NGLGFGDGYV EVLAATQTPG ESGKRWFQGT ADAVRQFHWL
201: FEDARSKDIE DVLILSGDHL YRMDYMDFIQ DHRQSGADIS ISCIPIDDRR ASDFGLMKID DKGRVISFSE KPKGDDLKAM AVDTTILGLS KEEAEKKPYI
301: ASMGVYVFKK EILLNLLRWR FPTANDFGSE IIPFSAKEFY VNAYLFNDYW EDIGTIRSFF EANLALTEHP GAFSFYDAAK PIYTSRRNLP PSKIDNSKLI
401: DSIISHGSFL TNCLIEHSIV GIRSRVGSNV QLKDTVMLGA DYYETEAEVA ALLAEGNVPI GIGENTKIQE CIIDKNARVG KNVIIANSEG IQEADRSSDG
501: FYIRSGITVI LKNSVIKDGV VI

Arabidopsis Description

ADG2Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55229]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.