Factsheet for HORVU0Hr1G033200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G023370.1	Barley	mitochondrion	31.53	89.42
HORVU1Hr1G001590.2	Barley	plastid	60.68	85.65
HORVU7Hr1G093330.2	Barley	plastid	70.85	85.31
HORVU4Hr1G025240.1	Barley	plastid	71.53	83.4
HORVU5Hr1G007240.2	Barley	plastid	32.2	59.38
TraesCS5B01G484700.1	Wheat	plastid	79.32	46.61
TraesCS5D01G484500.2	Wheat	plastid	78.98	46.14
TraesCS5A01G472000.1	Wheat	plastid	77.97	45.54
EER90919	Sorghum	plastid	72.2	42.01
Os03t0735000-01	Rice	plastid	71.53	41.29
Zm00001d033910_P002	Maize	plastid	71.19	40.08
PGSC0003DMT400023304	Potato	cytosol, plastid	65.08	37.28
CDX92546	Canola	plastid	64.75	37.02
Bra002221.1-P	Field mustard	plastid	64.75	37.02
Solyc01g079790.2.1	Tomato	nucleus, plastid	64.41	36.89
CDY68209	Canola	plastid	64.41	36.82
AT5G19220.1	Thale cress	plastid	65.08	36.78
VIT_05s0020g02880.t01	Wine grape	plastid	64.07	36.35
CDY02573	Canola	plastid	63.39	36.24
Bra023713.1-P	Field mustard	plastid	63.39	36.24
KRH51050	Soybean	nucleus, plastid	63.05	35.77
GSMUA_Achr1P11820_001	Banana	plastid	65.42	35.54
KRH02097	Soybean	nucleus, plastid	62.71	35.37
CDY47206	Canola	plastid	63.73	34.75
HORVU1Hr1G091600.9	Barley	plastid	48.14	27.05
HORVU7Hr1G067620.2	Barley	plastid	46.78	26.85
HORVU0Hr1G014150.5	Barley	cytosol	0.34	0.48

Protein Annotations

EnsemblPlants:HORVU0Hr1G033200.1	EnsemblPlantsGene:HORVU0Hr1G033200	Gene3D:3.90.550.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0016740	GO:GO:0016779	InterPro:IPR029044	InterPro:NTP_transferase_dom
InterPro:Nucleotide-diphossugar_trans	PANTHER:PTHR43523	PANTHER:PTHR43523:SF8	PFAM:PF00483	SEG:seg	SUPFAM:SSF53448
UniParc:UPI000B484BE8	UniProt:A0A287EB72	MapMan:3.2.2.3	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:199373612..199376227

Molecular Weight (calculated)

31719.2 Da

IEP (calculated)

8.470

GRAVY (calculated)

-0.186

Length

295 amino acids

Sequence
(BLAST)

001: XXXXXXXPAP PPLPPSPTSP PSLLLGCACF RPLQGRRQCC PSVRVSVTTM ESVAAIAVAT SADEDTETTI PRTVVAVILG GGAGTRLFPF TKRRAKPTVL
101: IGDAYRLIDV PMRNCINIGI NKVYVLTQFN SASLNRHLSR AYNFSNGVGF GDGFDEVLAA TQRPGSEGKR WFQGTTDAVR QFAWLFDDAK SKDIEDVLIL
201: SGDHLYRMDY MDFVQSHRQR DAGINICCLP IDDTRASDFG LMKIDDTRRV ISFSEKPRGA DLKAMQVDTT LLGLMKEEAE KKPYIASMGS YIFKK

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.