Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G007240.2 | Barley | plastid | 73.08 | 47.5 |
| HORVU1Hr1G001590.2 | Barley | plastid | 92.31 | 45.93 |
| HORVU4Hr1G025240.1 | Barley | plastid | 89.42 | 36.76 |
| HORVU7Hr1G093330.2 | Barley | plastid | 85.58 | 36.33 |
| HORVU0Hr1G033200.1 | Barley | plastid | 89.42 | 31.53 |
| HORVU1Hr1G091600.9 | Barley | plastid | 66.35 | 13.14 |
| HORVU7Hr1G067620.2 | Barley | plastid | 64.42 | 13.04 |
| HORVU0Hr1G014150.5 | Barley | cytosol | 0.96 | 0.48 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G023370.1 | EnsemblPlantsGene:HORVU3Hr1G023370 | Gene3D:3.90.550.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0016740 | GO:GO:0016779 | InterPro:IPR029044 | InterPro:NTP_transferase_dom |
| InterPro:Nucleotide-diphossugar_trans | PANTHER:PTHR43523 | PANTHER:PTHR43523:SF8 | PFAM:PF00483 | SUPFAM:SSF53448 | UniParc:UPI000B47C22B |
| UniProt:A0A287KFD8 | MapMan:50.2.7 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:86454374..86458519
Molecular Weight (calculated)
11326.8 Da
IEP (calculated)
11.765
GRAVY (calculated)
-0.115
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MNPRTVVAVI LGGGGRTRLF PLTKRRAKPT VPIGGAYRLI DVPMSNCINS GINKVYVLTQ FNSASLNRHL SRAYKFSNGV GFGDGFVEVL AATQRPGSEG
101: KRWF
101: KRWF
001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI
Arabidopsis Description
APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.