Factsheet for HORVU1Hr1G001590.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU3Hr1G023370.1	Barley	mitochondrion	45.93	92.31
HORVU7Hr1G093330.2	Barley	plastid	89.0	75.92
HORVU4Hr1G025240.1	Barley	plastid	86.12	71.15
HORVU5Hr1G007240.2	Barley	plastid	46.89	61.25
HORVU0Hr1G033200.1	Barley	plastid	85.65	60.68
TraesCS5B01G484700.1	Wheat	plastid	77.99	32.47
TraesCS5D01G484500.2	Wheat	plastid	77.99	32.28
TraesCS5A01G472000.1	Wheat	plastid	76.56	31.68
Os03t0735000-01	Rice	plastid	70.33	28.77
EER90919	Sorghum	plastid	69.38	28.6
Zm00001d033910_P002	Maize	plastid	68.9	27.48
GSMUA_Achr1P11820_001	Banana	plastid	66.03	25.41
VIT_05s0020g02880.t01	Wine grape	plastid	63.16	25.38
PGSC0003DMT400023304	Potato	cytosol, plastid	61.72	25.05
Solyc01g079790.2.1	Tomato	nucleus, plastid	61.72	25.05
KRH02097	Soybean	nucleus, plastid	62.68	25.05
CDY68209	Canola	plastid	61.72	25.0
KRH51050	Soybean	nucleus, plastid	62.2	25.0
CDX92546	Canola	plastid	61.72	25.0
Bra002221.1-P	Field mustard	plastid	61.72	25.0
AT5G19220.1	Thale cress	plastid	62.2	24.9
CDY02573	Canola	plastid	60.29	24.42
Bra023713.1-P	Field mustard	plastid	60.29	24.42
CDY47206	Canola	plastid	60.77	23.48
HORVU1Hr1G091600.9	Barley	plastid	48.33	19.24
HORVU7Hr1G067620.2	Barley	plastid	45.45	18.48
HORVU0Hr1G014150.5	Barley	cytosol	0.48	0.48

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	MapMan:3.2.2.3	Gene3D:3.90.550.10	UniProt:A0A287EFM9	InterPro:ADP_Glu_pyroP_CS
GO:GO:0003674	GO:GO:0003824	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150
GO:GO:0008152	GO:GO:0008878	GO:GO:0009058	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779
EnsemblPlantsGene:HORVU1Hr1G001590	EnsemblPlants:HORVU1Hr1G001590.2	InterPro:IPR029044	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483
ScanProsite:PS00809	PANTHER:PTHR43523	PANTHER:PTHR43523:SF8	SUPFAM:SSF53448	UniParc:UPI000B4825A6	SEG:seg

Description

No Description!

Coordinates

chrchr1H:+:3721354..3723955

Molecular Weight (calculated)

22342.8 Da

IEP (calculated)

8.201

GRAVY (calculated)

0.010

Length

209 amino acids

Sequence
(BLAST)

001: PISCSTSPAP SPPPPSSLLL GCARVRPLQG RRQCCPSACV SVATMESAAA VPVAASADED TETTNPRTVV AVILGGGAGI RLFPLTKRRA KPTVPIGCAY
101: RLIDVPMSNC INIGINKVYV LTQFNSASLN RHLSRAYNFS NGVGFGDGFG EVLAATQRPG SEGKRWFQGT ADAVRQFAWL FDNAKSKDIE DVLILSGDHL
201: YCMDYMDFV

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.