CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH51516	Soybean	plastid	97.5	97.5
KRH24456	Soybean	plastid	86.71	85.23
KRH29435	Soybean	cytosol	85.74	83.96
VIT_03s0038g04570.t01	Wine grape	cytosol	78.03	76.85
Solyc01g109790.2.1	Tomato	extracellular	73.8	73.09
PGSC0003DMT400001935	Potato	plastid	69.94	72.6
Bra033604.1-P	Field mustard	cytosol, plastid	72.83	72.28
AT4G39210.1	Thale cress	plastid	71.1	70.83
AT2G21590.4	Thale cress	plastid	71.29	70.75
Bra030291.1-P	Field mustard	cytosol, plastid	70.71	70.58
CDY15884	Canola	cytosol, plastid	70.52	70.38
GSMUA_Achr4P02930_001	Banana	mitochondrion	61.46	69.8
CDX99581	Canola	cytosol, plastid	70.52	69.71
KRH51829	Soybean	plastid	71.1	69.49
GSMUA_Achr4P10620_001	Banana	mitochondrion, vacuole	61.66	69.26
KRH61137	Soybean	plastid	70.13	68.68
GSMUA_Achr6P27190_001	Banana	cytosol, nucleus, plastid	68.02	67.37
GSMUA_Achr9P06920_001	Banana	cytosol	67.05	67.05
CDY56761	Canola	endoplasmic reticulum	73.03	63.7
KRH15167	Soybean	mitochondrion, plastid	63.39	62.91
HORVU1Hr1G091600.9	Barley	plastid	63.2	62.48
Os05t0580000-01	Rice	plastid	62.43	62.43
TraesCS1B01G449700.2	Wheat	plastid	63.2	62.12
KRH05853	Soybean	plastid	62.62	62.02
KRG96634	Soybean	plastid	61.27	60.11
KRH68365	Soybean	plastid	60.69	59.55
CDX72711	Canola	cytosol	71.87	59.02
Os01t0633100-01	Rice	plastid	58.38	58.49
Zm00001d039131_P007	Maize	plastid	62.43	58.06
KRH51050	Soybean	nucleus, plastid	58.0	57.88
KRH02097	Soybean	nucleus, plastid	58.19	57.74
TraesCS1D01G427400.2	Wheat	plastid	59.54	57.12
TraesCS1A01G419600.2	Wheat	plastid	59.34	56.93
OQU87201	Sorghum	plastid	56.45	56.67
KRH14151	Soybean	cytosol	17.53	49.73
KRH73984	Soybean	nucleus, plastid	47.59	47.96
OQU78492	Sorghum	plastid	62.62	47.86
KRH14152	Soybean	plastid	29.48	47.66
Zm00001d044129_P001	Maize	cytosol, nucleus, plastid	55.11	43.47

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	EntrezGene:100796717	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10
EMBL:ACUP02002140	InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	EnsemblPlantsGene:GLYMA_04G011900	GO:GO:0000166	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005975	GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152
GO:GO:0008878	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740
GO:GO:0016779	GO:GO:0019252	InterPro:IPR029044	UniProt:K7KHJ1	EnsemblPlants:KRH60824	ProteinID:KRH60824
ProteinID:KRH60824.1	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809
ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF4	MetaCyc:PWY-622	SUPFAM:SSF51161	SUPFAM:SSF53448
TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI000233A06E	:	:	:

Description

hypothetical protein

Coordinates

chr4:+:894728..899258

Molecular Weight (calculated)

57074.2 Da

IEP (calculated)

6.359

GRAVY (calculated)

-0.145

Length

519 amino acids

Sequence
(BLAST)

001: MASACVTLKS NTHLANSEKG FLGERIKGGF NNSALVMNQL AIRSRSHKRV KHGVGVVSAV LTSNNAKESL TLQVPSFLRR RADPKNVISI ILGGGPGTQL
101: FPLTKRAATP AVPVGGCYRL IDIPMSNCLN SGINKIFVLT QFNSASLNRH IARTYFGNGI NFGDGIVEVL AATQTPGEAG KNWFQGTADA VRQFTWVFED
201: AKNTNVENVL ILAGDHLYRM DYMDLVQSHV DRNADITVSC AAVGDSRASD YGLVKVDDRG RIIQFSEKPN GDDLKAMQAD TSLLGLSPQD ALKSPYIASM
301: GVYVFKTDVL LNLLKWRYPT SNDFGSEIIP AAVRDHDVQS YFFEDYWEDI GTIKSFYDAN LALTEESHKF EFYDPKIPIY TSPGFLPPTK IDKCQIVDAI
401: ISHGCFLREC TVQHSIVGER SRLDYGVELL DTVMMGADYY QTESEIASLL AEGKVPIGIG RNTKIRNCII DKNAKIGKDV IIANKDGVQE ADRPEDGFYI
501: RSGITIIMEK ATIEDGTIV

Best Arabidopsis Sequence Match ( AT4G39210.1 )
(BLAST)

001: MDSCCNFSLG TKTVLAKDSF KNVENKFLGE KIKGSVLKPF SSDLSSKKFR NRKLRPGVAY AIATSKNAKE ALKNQPSMFE RRRADPKNVA AIILGGGDGA
101: KLFPLTKRAA TPAVPVGGCY RMIDIPMSNC INSCINKIFV LTQFNSASLN RHLARTYFGN GINFGDGFVE VLAATQTPGE AGKKWFQGTA DAVRKFLWVF
201: EDAKNRNIEN IIILSGDHLY RMNYMDFVQH HVDSKADITL SCAPVDESRA SEYGLVNIDR SGRVVHFSEK PTGIDLKSMQ TDTTMHGLSH QEAAKSPYIA
301: SMGVYCFKTE ALLKLLTWRY PSSNDFGSEI IPAAIKDHNV QGYIYRDYWE DIGTIKSFYE ANIALVEEHP KFEFYDQNTP FYTSPRFLPP TKTEKCRIVN
401: SVISHGCFLG ECSIQRSIIG ERSRLDYGVE LQDTLMLGAD SYQTESEIAS LLAEGNVPIG IGRDTKIRKC IIDKNAKIGK NVVIMNKDDV KEADRPEEGF
501: YIRSGITVVV EKATIKDGTV I

Arabidopsis Description

APL3Glucose-1-phosphate adenylyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A178US50]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.