CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d019266_P002	Maize	plastid	90.45	89.75
Os07t0243200-01	Rice	plastid	82.26	82.91
VIT_07s0005g02800.t01	Wine grape	plastid	68.23	68.09
KRG96634	Soybean	plastid	66.67	64.65
KRH68365	Soybean	plastid	66.08	64.08
EER90919	Sorghum	plastid	58.28	58.97
OQU87201	Sorghum	plastid	54.39	53.97
EER98661	Sorghum	plastid	49.71	50.0
KXG24924	Sorghum	plastid	49.32	48.94
OQU78492	Sorghum	plastid	56.14	42.42

Protein Annotations

KEGG:00500+2.7.7.27	KEGG:00520+2.7.7.27	Gene3D:2.160.10.10	MapMan:3.2.2.3	Gene3D:3.90.550.10	UniProt:A0A1B6QA12
InterPro:ADP-Glc_PPase	InterPro:ADP_Glu_pyroP_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005975
GO:GO:0005978	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0008878	GO:GO:0009058
GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0016740	GO:GO:0016779	GO:GO:0019252
InterPro:IPR029044	ProteinID:KXG34767.1	InterPro:NTP_transferase_dom	InterPro:Nucleotide-diphossugar_trans	ProteinID:OQU88759.1	EnsemblPlants:OQU88760
ProteinID:OQU88760	ProteinID:OQU88760.1	ProteinID:OQU88761.1	PFAM:PF00483	ScanProsite:PS00808	ScanProsite:PS00809
ScanProsite:PS00810	PANTHER:PTHR43523	PANTHER:PTHR43523:SF11	MetaCyc:PWY-622	EnsemblPlantsGene:SORBI_3002G088600	SUPFAM:SSF51161
SUPFAM:SSF53448	TIGRFAMs:TIGR02091	InterPro:Trimer_LpxA-like_sf	UniParc:UPI00081ACE91	SEG:seg	:

Description

hypothetical protein

Coordinates

chr2:-:9335515..9345537

Molecular Weight (calculated)

55982.2 Da

IEP (calculated)

7.698

GRAVY (calculated)

-0.067

Length

513 amino acids

Sequence
(BLAST)

001: MACPAAPHAS AAFLASPAAP LPARRASPPA AAPRRALSAA ATTTTSFVLA DAPRGIKEEQ ADAGAQAAAV ARRDVSPDTV ASIILGGGAG TRLFPLTRTR
101: AKPAVPVGGC YRLIDIPMSN CINSKINKIY VLTQFNSQSL NRHIARTYNF GEGVGFSGGS VEVLAATQTA GESGKKWFQG TADAVRQFLW LFEDARLKCI
201: ENILILSGDH LYRMDYMDFV QKHVDSGADI SVACVPMDES RASDFGLMKA DRNGRITDFL EKPKGENLKS MQVDMGLFGL SPEFASTYKY MASMGIYVFK
301: ADVLRKLLRG HYPTANDFGS EVIPMAAKDY DVQAYLFDGY WEDIGTIKSF FEANLALTDQ FPNFYFYDPV KPIFTSPRFL PPTKVENCKV LNSIISHGCF
401: LTECSVEHSV IGIRSRLELG VQLKDTMMMG ADYYQTEVER LSELSVGKVP VGVGENTKIR NCIIDKNARI GKNVVIMNSE NVQEADRTAE GYYIRSGITV
501: VLKNAVILNG TTI

Best Arabidopsis Sequence Match ( AT1G27680.1 )
(BLAST)

001: MESCFPAMKL NQCTFGLNNE IVSERVSAFW GTQVVKPNHL RTTKLRSAPQ KKIQTNLIRS VLTPFVDQES HEPLLRTQNA DPKNVASIIL GGGAGTRLFP
101: LTSKRAKPAV PIGGCYRLID IPMSNCINSG IRKIFILTQF NSFSLNRHLS RTYNFGNGVN FGDGFVEVLA ATQTSGDAGK KWFQGTADAV RQFIWVFEDA
201: KTKNVEHVLI LSGDHLYRMD YMNFVQKHIE SNADITVSCL PMDESRASDF GLLKIDQSGK IIQFSEKPKG DDLKAMQVDT SILGLPPKEA AESPYIASMG
301: VYVFRKEVLL KLLRSSYPTS NDFGSEIIPL AVGEHNVQAF LFNDYWEDIG TIGSFFDANL ALTEQPPKFQ FYDQKTPFFT SPRFLPPTKV DKCRILDSIV
401: SHGCFLRECS VQHSIVGIRS RLESGVELQD TMMMGADFYQ TEAEIASLLA EGKVPVGVGQ NTKIKNCIID KNAKIGKNVV IANADGVEEG DRPEEGFHIR
501: SGITVVLKNA TIRDGLHI

Arabidopsis Description

APL2Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P55230]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.