Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH25791 | Soybean | nucleus | 39.16 | 61.54 |
| VIT_19s0014g01260.t01 | Wine grape | nucleus | 56.64 | 57.04 |
| Solyc10g007350.2.1 | Tomato | nucleus | 53.85 | 55.4 |
| Solyc07g062400.2.1 | Tomato | nucleus | 53.15 | 54.29 |
| VIT_12s0028g02020.t01 | Wine grape | nucleus | 53.85 | 54.23 |
| Solyc09g055470.1.1 | Tomato | nucleus | 52.45 | 53.96 |
| Solyc12g014290.1.1 | Tomato | nucleus | 51.75 | 53.24 |
| GSMUA_Achr1P04810_001 | Banana | nucleus | 51.75 | 52.11 |
| GSMUA_Achr1P11510_001 | Banana | nucleus | 51.75 | 52.11 |
| GSMUA_Achr9P00250_001 | Banana | nucleus | 51.75 | 52.11 |
| HORVU2Hr1G092600.4 | Barley | extracellular, nucleus | 55.24 | 35.27 |
| PGSC0003DMT400054878 | Potato | nucleus | 27.97 | 27.78 |
| HORVU7Hr1G085130.1 | Barley | cytosol | 28.67 | 26.28 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G029320.4 | EnsemblPlantsGene:HORVU3Hr1G029320 | Gene3D:1.10.260.40 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0005488 | GO:GO:0043565 | InterPro:Cro/C1-type_HTH | InterPro:IPR001387 | InterPro:Lambda_DNA-bd_dom_sf | ncoils:Coil |
| PANTHER:PTHR10245 | PANTHER:PTHR10245:SF101 | PFAM:PF01381 | PFscan:PS50943 | SEG:seg | SMART:SM00530 |
| SUPFAM:SSF47413 | UniParc:UPI000B4654F7 | UniProt:A0A287KKJ4 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr3H:+:134887099..134890867
Molecular Weight (calculated)
16233.4 Da
IEP (calculated)
11.555
GRAVY (calculated)
-1.220
Length
143 amino acids
Sequence
(BLAST)
(BLAST)
001: DHSHRPHPHR LQPRRNPSHT GSRSKPRCLA RDRSLRTGSR WSCARSCPTP PPRRTAAHST TSLNTKRLDD DTENLAHERV PSDLKKSIMQ ARTDKKLTQA
101: QLAQLINEKP QVIQEYESGK AIPNQQIIGK LERALGTKLR GKK
101: QLAQLINEKP QVIQEYESGK AIPNQQIIGK LERALGTKLR GKK
001: MAGIGPITQD WEPVVIRKKP ANAAAKRDEK TVNAARRSGA DIETVRKFNA GTNKAASSGT SLNTKMLDDD TENLTHERVP TELKKAIMQA RTDKKLTQSQ
101: LAQIINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
101: LAQIINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
Arabidopsis Description
MBF1AMBF1A [Source:UniProtKB/TrEMBL;Acc:A0A178VSD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.