Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g007350.2.1 | Tomato | nucleus | 98.56 | 98.56 |
| Solyc12g014290.1.1 | Tomato | nucleus | 91.37 | 91.37 |
| Solyc07g062400.2.1 | Tomato | nucleus | 90.65 | 90.0 |
| KRH25792 | Soybean | nucleus | 87.05 | 85.21 |
| KRH55726 | Soybean | nucleus | 87.05 | 85.21 |
| KRH55727 | Soybean | nucleus | 87.05 | 85.21 |
| GSMUA_Achr1P11510_001 | Banana | nucleus | 83.45 | 81.69 |
| VIT_19s0014g01260.t01 | Wine grape | nucleus | 83.45 | 81.69 |
| AT3G58680.1 | Thale cress | nucleus | 82.73 | 80.99 |
| GSMUA_Achr1P04810_001 | Banana | nucleus | 82.73 | 80.99 |
| VIT_12s0028g02020.t01 | Wine grape | nucleus | 82.73 | 80.99 |
| CDX98319 | Canola | nucleus | 82.01 | 80.28 |
| CDY50816 | Canola | nucleus | 82.01 | 80.28 |
| CDX79844 | Canola | nucleus | 82.01 | 80.28 |
| GSMUA_Achr9P00250_001 | Banana | nucleus | 82.01 | 80.28 |
| Bra004725.1-P | Field mustard | nucleus | 82.01 | 80.28 |
| CDY42821 | Canola | nucleus | 81.3 | 79.58 |
| CDX83520 | Canola | nucleus | 81.3 | 79.58 |
| AT2G42680.1 | Thale cress | nucleus | 81.3 | 79.58 |
| Bra000272.1-P | Field mustard | nucleus | 81.3 | 79.58 |
| Bra007411.1-P | Field mustard | nucleus | 64.75 | 78.95 |
| Zm00001d049320_P001 | Maize | nucleus | 80.58 | 78.87 |
| Bra014559.1-P | Field mustard | nucleus | 80.58 | 78.87 |
| CDX88998 | Canola | nucleus | 80.58 | 78.87 |
| Zm00001d032359_P002 | Maize | extracellular | 79.86 | 78.17 |
| EES14877 | Sorghum | nucleus | 79.14 | 77.46 |
| Os08t0366100-01 | Rice | extracellular, nucleus, plasma membrane | 78.42 | 76.76 |
| CDY00581 | Canola | nucleus | 77.7 | 76.06 |
| TraesCS3D01G151300.1 | Wheat | nucleus | 76.26 | 74.65 |
| TraesCS3B01G169100.1 | Wheat | nucleus | 76.26 | 74.65 |
| TraesCS3A01G135300.1 | Wheat | nucleus | 76.26 | 74.65 |
| TraesCS2B01G407000.1 | Wheat | nucleus | 75.54 | 73.94 |
| TraesCS2D01G386800.1 | Wheat | nucleus | 75.54 | 73.94 |
| TraesCS2A01G389000.1 | Wheat | nucleus | 75.54 | 73.94 |
| KRH25791 | Soybean | nucleus | 43.17 | 65.93 |
| CDY49243 | Canola | cytosol | 79.14 | 65.09 |
| CDY52458 | Canola | nucleus | 54.68 | 64.96 |
| HORVU3Hr1G029320.4 | Barley | nucleus, plastid | 53.96 | 52.45 |
| HORVU2Hr1G092600.4 | Barley | extracellular, nucleus | 74.1 | 45.98 |
| Solyc01g104740.2.1 | Tomato | extracellular | 43.17 | 41.1 |
Protein Annotations
| Gene3D:1.10.260.40 | MapMan:35.1 | ncoils:Coil | InterPro:Cro/C1-type_HTH | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0005488 | GO:GO:0043565 | InterPro:IPR001387 | UniProt:K4CT44 | InterPro:Lambda_DNA-bd_dom_sf |
| InterPro:MBF1_N | PFAM:PF01381 | PFAM:PF08523 | PFscan:PS50943 | PANTHER:PTHR10245 | PANTHER:PTHR10245:SF23 |
| SMART:SM00530 | SUPFAM:SSF47413 | EnsemblPlantsGene:Solyc09g055470.1 | EnsemblPlants:Solyc09g055470.1.1 | UniParc:UPI000276AF53 | SEG:seg |
Description
No Description!
Coordinates
chr9:-:41135150..41135569
Molecular Weight (calculated)
15354.3 Da
IEP (calculated)
10.709
GRAVY (calculated)
-0.955
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGISQDWEP VVIRKKAPTS AARKDEKAVN AARRSGAEIE TVKKSNAGSN RAASSSTSLN TRKLDEDTEN LSHEKVPTEL KKAIMQARQD KKLTQSQLAQ
101: LTNEKPQIIQ EYESGKTIPN QQIISKLERA LGAKLRGKK
101: LTNEKPQIIQ EYESGKTIPN QQIISKLERA LGAKLRGKK
001: MAGIGPITQD WEPVVIRKRA PNAAAKRDEK TVNAARRSGA DIETVRKFNA GSNKAASSGT SLNTKKLDDD TENLSHDRVP TELKKAIMQA RGEKKLTQSQ
101: LAHLINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
101: LAHLINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
Arabidopsis Description
MBF1BMultiprotein-bridging factor 1b [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.