Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra007411.1-P | Field mustard | nucleus | 75.35 | 93.86 |
| AT2G42680.1 | Thale cress | nucleus | 92.25 | 92.25 |
| CDX98319 | Canola | nucleus | 91.55 | 91.55 |
| Bra014559.1-P | Field mustard | nucleus | 90.85 | 90.85 |
| CDX88998 | Canola | nucleus | 90.85 | 90.85 |
| CDY00581 | Canola | nucleus | 88.03 | 88.03 |
| Solyc12g014290.1.1 | Tomato | nucleus | 82.39 | 84.17 |
| Solyc10g007350.2.1 | Tomato | nucleus | 82.39 | 84.17 |
| KRH55726 | Soybean | nucleus | 83.8 | 83.8 |
| Solyc09g055470.1.1 | Tomato | nucleus | 80.99 | 82.73 |
| KRH55727 | Soybean | nucleus | 82.39 | 82.39 |
| Zm00001d049320_P001 | Maize | nucleus | 82.39 | 82.39 |
| KRH25792 | Soybean | nucleus | 82.39 | 82.39 |
| GSMUA_Achr1P11510_001 | Banana | nucleus | 81.69 | 81.69 |
| VIT_12s0028g02020.t01 | Wine grape | nucleus | 81.69 | 81.69 |
| Zm00001d032359_P002 | Maize | extracellular | 80.99 | 80.99 |
| Solyc07g062400.2.1 | Tomato | nucleus | 79.58 | 80.71 |
| GSMUA_Achr1P04810_001 | Banana | nucleus | 80.28 | 80.28 |
| EES14877 | Sorghum | nucleus | 80.28 | 80.28 |
| Os08t0366100-01 | Rice | extracellular, nucleus, plasma membrane | 79.58 | 79.58 |
| VIT_19s0014g01260.t01 | Wine grape | nucleus | 79.58 | 79.58 |
| GSMUA_Achr9P00250_001 | Banana | nucleus | 78.87 | 78.87 |
| TraesCS2A01G389000.1 | Wheat | nucleus | 78.17 | 78.17 |
| TraesCS2D01G386800.1 | Wheat | nucleus | 78.17 | 78.17 |
| TraesCS2B01G407000.1 | Wheat | nucleus | 78.17 | 78.17 |
| TraesCS3A01G135300.1 | Wheat | nucleus | 77.46 | 77.46 |
| TraesCS3B01G169100.1 | Wheat | nucleus | 77.46 | 77.46 |
| TraesCS3D01G151300.1 | Wheat | nucleus | 77.46 | 77.46 |
| CDY49243 | Canola | cytosol | 90.85 | 76.33 |
| CDY52458 | Canola | nucleus | 62.68 | 76.07 |
| HORVU2Hr1G092600.4 | Barley | extracellular, nucleus | 78.17 | 49.55 |
| AT3G24500.1 | Thale cress | cytosol | 50.0 | 47.97 |
| PGSC0003DMT400054878 | Potato | nucleus | 26.06 | 25.69 |
Protein Annotations
| Gene3D:1.10.260.40 | MapMan:35.1 | EntrezGene:825037 | UniProt:A0A178V9J8 | ProteinID:AEE79817.1 | EMBL:AF324717 |
| EMBL:AF326909 | EMBL:AF339728 | ArrayExpress:AT3G58680 | EnsemblPlantsGene:AT3G58680 | RefSeq:AT3G58680 | TAIR:AT3G58680 |
| RefSeq:AT3G58680-TAIR-G | EnsemblPlants:AT3G58680.1 | TAIR:AT3G58680.1 | EMBL:AY042850 | EMBL:AY081487 | EMBL:AY084597 |
| ProteinID:CAB88285.1 | InterPro:Cro/C1-type_HTH | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045893 | InterPro:IPR001387 | InterPro:Lambda_DNA-bd_dom_sf |
| Symbol:MBF1B | InterPro:MBF1_N | RefSeq:NP_191427.1 | ProteinID:OAP02348.1 | PFAM:PF01381 | PFAM:PF08523 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50943 |
| PANTHER:PTHR10245 | PANTHER:PTHR10245:SF23 | UniProt:Q9LXT3 | SMART:SM00530 | SUPFAM:SSF47413 | UniParc:UPI000005EBA1 |
Description
MBF1BMultiprotein-bridging factor 1b [Source:UniProtKB/Swiss-Prot;Acc:Q9LXT3]
Coordinates
chr3:+:21707247..21708972
Molecular Weight (calculated)
15582.7 Da
IEP (calculated)
10.750
GRAVY (calculated)
-0.822
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIGPITQD WEPVVIRKRA PNAAAKRDEK TVNAARRSGA DIETVRKFNA GSNKAASSGT SLNTKKLDDD TENLSHDRVP TELKKAIMQA RGEKKLTQSQ
101: LAHLINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
101: LAHLINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.