Factsheet for AT3G24500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX77422	Canola	cytosol	93.92	93.92
VIT_11s0016g04080.t01	Wine grape	cytosol	75.0	77.08
Bra015048.1-P	Field mustard	cytosol	92.57	74.46
PGSC0003DMT400076572	Potato	cytosol	68.24	69.18
Solyc01g104740.2.1	Tomato	extracellular	65.54	66.44
CDY39547	Canola	cytosol	91.89	63.26
EER89991	Sorghum	cytosol	60.14	57.42
TraesCS7D01G353800.1	Wheat	cytosol	59.46	57.14
HORVU7Hr1G085130.1	Barley	cytosol	59.46	56.41
TraesCS7A01G369500.1	Wheat	cytosol	57.43	56.29
TraesCS7B01G259000.1	Wheat	cytosol	58.78	55.77
Os06t0592500-01	Rice	cytosol	58.11	55.48
AT3G58680.1	Thale cress	nucleus	47.97	50.0
AT2G42680.1	Thale cress	nucleus	45.95	47.89
Zm00001d046471_P001	Maize	nucleus, plastid	43.92	40.88

Protein Annotations

Gene3D:1.10.260.40	MapMan:35.1	EntrezGene:822041	UniProt:A0A178VDH9	ProteinID:AEE76905.1	EMBL:AK227957
ArrayExpress:AT3G24500	EnsemblPlantsGene:AT3G24500	RefSeq:AT3G24500	TAIR:AT3G24500	RefSeq:AT3G24500-TAIR-G	EnsemblPlants:AT3G24500.1
TAIR:AT3G24500.1	EMBL:AY085593	ProteinID:BAB01997.1	EMBL:BT004761	ncoils:Coil	InterPro:Cro/C1-type_HTH
GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0003700	GO:GO:0003713	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730	GO:GO:0005737
GO:GO:0006139	GO:GO:0006351	GO:GO:0006355	GO:GO:0006950	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009408	GO:GO:0009414	GO:GO:0009628
GO:GO:0009719	GO:GO:0009737	GO:GO:0009873	GO:GO:0009987	GO:GO:0043565	GO:GO:0045893
InterPro:IPR001387	InterPro:Lambda_DNA-bd_dom_sf	Symbol:MBF1C	InterPro:MBF1_N	RefSeq:NP_189093.1	ProteinID:OAP04487.1
PFAM:PF01381	PFAM:PF08523	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103	PO:PO:0007115
PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005	PO:PO:0009006
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020038
PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PFscan:PS50943
PANTHER:PTHR10245	PANTHER:PTHR10245:SF71	UniProt:Q9LV58	SMART:SM00530	SUPFAM:SSF47413	UniParc:UPI000000C46F

Description

MBF1CMBF1C [Source:UniProtKB/TrEMBL;Acc:A0A178VDH9]

Coordinates

chr3:+:8918267..8919358

Molecular Weight (calculated)

16404.1 Da

IEP (calculated)

10.740

GRAVY (calculated)

-0.692

Length

148 amino acids

Sequence
(BLAST)

001: MPSRYPGAVT QDWEPVVLHK SKQKSQDLRD PKAVNAALRN GVAVQTVKKF DAGSNKKGKS TAVPVINTKK LEEETEPAAM DRVKAEVRLM IQKARLEKKM
101: SQADLAKQIN ERTQVVQEYE NGKAVPNQAV LAKMEKVLGV KLRGKIGK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.