Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000272.1-P | Field mustard | nucleus | 92.96 | 92.96 |
| CDX83520 | Canola | nucleus | 92.96 | 92.96 |
| CDY42821 | Canola | nucleus | 92.96 | 92.96 |
| AT3G58680.1 | Thale cress | nucleus | 92.25 | 92.25 |
| Bra004725.1-P | Field mustard | nucleus | 91.55 | 91.55 |
| CDX79844 | Canola | nucleus | 91.55 | 91.55 |
| CDY50816 | Canola | nucleus | 91.55 | 91.55 |
| KRH55726 | Soybean | nucleus | 85.21 | 85.21 |
| Zm00001d049320_P001 | Maize | nucleus | 83.8 | 83.8 |
| VIT_19s0014g01260.t01 | Wine grape | nucleus | 83.8 | 83.8 |
| VIT_12s0028g02020.t01 | Wine grape | nucleus | 83.8 | 83.8 |
| KRH55727 | Soybean | nucleus | 83.8 | 83.8 |
| KRH25792 | Soybean | nucleus | 83.8 | 83.8 |
| Zm00001d032359_P002 | Maize | extracellular | 83.1 | 83.1 |
| Solyc10g007350.2.1 | Tomato | nucleus | 80.99 | 82.73 |
| EES14877 | Sorghum | nucleus | 82.39 | 82.39 |
| Solyc12g014290.1.1 | Tomato | nucleus | 80.28 | 82.01 |
| GSMUA_Achr1P11510_001 | Banana | nucleus | 81.69 | 81.69 |
| Os08t0366100-01 | Rice | extracellular, nucleus, plasma membrane | 81.69 | 81.69 |
| Solyc09g055470.1.1 | Tomato | nucleus | 79.58 | 81.3 |
| GSMUA_Achr1P04810_001 | Banana | nucleus | 80.28 | 80.28 |
| TraesCS2A01G389000.1 | Wheat | nucleus | 80.28 | 80.28 |
| TraesCS2B01G407000.1 | Wheat | nucleus | 80.28 | 80.28 |
| TraesCS2D01G386800.1 | Wheat | nucleus | 80.28 | 80.28 |
| TraesCS3A01G135300.1 | Wheat | nucleus | 80.28 | 80.28 |
| TraesCS3B01G169100.1 | Wheat | nucleus | 80.28 | 80.28 |
| TraesCS3D01G151300.1 | Wheat | nucleus | 80.28 | 80.28 |
| GSMUA_Achr9P00250_001 | Banana | nucleus | 79.58 | 79.58 |
| Solyc07g062400.2.1 | Tomato | nucleus | 78.17 | 79.29 |
| HORVU2Hr1G092600.4 | Barley | extracellular, nucleus | 78.87 | 50.0 |
| AT3G24500.1 | Thale cress | cytosol | 47.89 | 45.95 |
| PGSC0003DMT400054878 | Potato | nucleus | 26.06 | 25.69 |
Protein Annotations
| Gene3D:1.10.260.40 | MapMan:35.1 | EntrezGene:818868 | UniProt:A0A178VSD5 | ProteinID:AAD21738.1 | ProteinID:AAM15391.1 |
| ProteinID:AEC10155.1 | EMBL:AF370280 | ArrayExpress:AT2G42680 | EnsemblPlantsGene:AT2G42680 | RefSeq:AT2G42680 | TAIR:AT2G42680 |
| RefSeq:AT2G42680-TAIR-G | EnsemblPlants:AT2G42680.1 | TAIR:AT2G42680.1 | EMBL:AY063014 | EMBL:AY088140 | InterPro:Cro/C1-type_HTH |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003713 | GO:GO:0003723 | GO:GO:0003729 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005730 |
| GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 |
| GO:GO:0009987 | GO:GO:0043565 | GO:GO:0045893 | InterPro:IPR001387 | InterPro:Lambda_DNA-bd_dom_sf | Symbol:MBF1A |
| InterPro:MBF1_N | RefSeq:NP_565981.1 | ProteinID:OAP07752.1 | PFAM:PF01381 | PFAM:PF08523 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PFscan:PS50943 | PANTHER:PTHR10245 | PANTHER:PTHR10245:SF23 |
| UniProt:Q9SJI8 | SMART:SM00530 | SUPFAM:SSF47413 | UniParc:UPI00000A7BF7 | : | : |
Description
MBF1AMBF1A [Source:UniProtKB/TrEMBL;Acc:A0A178VSD5]
Coordinates
chr2:+:17774832..17776320
Molecular Weight (calculated)
15620.8 Da
IEP (calculated)
10.656
GRAVY (calculated)
-0.775
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIGPITQD WEPVVIRKKP ANAAAKRDEK TVNAARRSGA DIETVRKFNA GTNKAASSGT SLNTKMLDDD TENLTHERVP TELKKAIMQA RTDKKLTQSQ
101: LAQIINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
101: LAQIINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.