Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| extracellular:
18372294
plasma membrane: 27800704 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES14877 | Sorghum | nucleus | 97.89 | 97.89 |
| Zm00001d049320_P001 | Maize | nucleus | 96.48 | 96.48 |
| Zm00001d032359_P002 | Maize | extracellular | 95.77 | 95.77 |
| TraesCS2D01G386800.1 | Wheat | nucleus | 92.25 | 92.25 |
| TraesCS2B01G407000.1 | Wheat | nucleus | 92.25 | 92.25 |
| TraesCS2A01G389000.1 | Wheat | nucleus | 92.25 | 92.25 |
| KRH55727 | Soybean | nucleus | 87.32 | 87.32 |
| KRH55726 | Soybean | nucleus | 87.32 | 87.32 |
| KRH25792 | Soybean | nucleus | 87.32 | 87.32 |
| GSMUA_Achr1P04810_001 | Banana | nucleus | 84.51 | 84.51 |
| GSMUA_Achr9P00250_001 | Banana | nucleus | 83.1 | 83.1 |
| GSMUA_Achr1P11510_001 | Banana | nucleus | 83.1 | 83.1 |
| Bra000272.1-P | Field mustard | nucleus | 81.69 | 81.69 |
| CDY42821 | Canola | nucleus | 81.69 | 81.69 |
| CDX98319 | Canola | nucleus | 81.69 | 81.69 |
| AT2G42680.1 | Thale cress | nucleus | 81.69 | 81.69 |
| CDX88998 | Canola | nucleus | 81.69 | 81.69 |
| CDX83520 | Canola | nucleus | 81.69 | 81.69 |
| VIT_19s0014g01260.t01 | Wine grape | nucleus | 80.99 | 80.99 |
| Bra014559.1-P | Field mustard | nucleus | 80.99 | 80.99 |
| CDY00581 | Canola | nucleus | 80.28 | 80.28 |
| Solyc10g007350.2.1 | Tomato | nucleus | 78.17 | 79.86 |
| AT3G58680.1 | Thale cress | nucleus | 79.58 | 79.58 |
| VIT_12s0028g02020.t01 | Wine grape | nucleus | 79.58 | 79.58 |
| CDX79844 | Canola | nucleus | 78.87 | 78.87 |
| Bra004725.1-P | Field mustard | nucleus | 78.87 | 78.87 |
| Solyc09g055470.1.1 | Tomato | nucleus | 76.76 | 78.42 |
| CDY50816 | Canola | nucleus | 78.17 | 78.17 |
| Solyc12g014290.1.1 | Tomato | nucleus | 76.06 | 77.7 |
| Bra007411.1-P | Field mustard | nucleus | 61.97 | 77.19 |
| Solyc07g062400.2.1 | Tomato | nucleus | 75.35 | 76.43 |
| CDY52458 | Canola | nucleus | 55.63 | 67.52 |
| CDY49243 | Canola | cytosol | 78.17 | 65.68 |
| HORVU2Hr1G092600.4 | Barley | extracellular, nucleus | 90.85 | 57.59 |
| Os06t0592500-01 | Rice | cytosol | 47.18 | 43.23 |
| PGSC0003DMT400054878 | Potato | nucleus | 25.35 | 25.0 |
Protein Annotations
| Gene3D:1.10.260.40 | MapMan:35.1 | EntrezGene:4345388 | EMBL:AK061882 | EMBL:AK120339 | ProteinID:BAD03357.1 |
| ProteinID:BAF23561.1 | ProteinID:BAT05142.1 | ncoils:Coil | InterPro:Cro/C1-type_HTH | ProteinID:EAZ42510.1 | GO:GO:0003674 |
| GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0043565 | InterPro:IPR001387 | InterPro:Lambda_DNA-bd_dom_sf |
| InterPro:MBF1_N | EnsemblPlantsGene:Os08g0366100 | EnsemblPlants:Os08t0366100-01 | PFAM:PF01381 | PFAM:PF08523 | PFscan:PS50943 |
| PANTHER:PTHR10245 | PANTHER:PTHR10245:SF101 | UniProt:Q6ZAE3 | SMART:SM00530 | SUPFAM:SSF47413 | UniParc:UPI00002260C5 |
| RefSeq:XP_015650143.1 | : | : | : | : | : |
Description
MBF1 transcription factor, Endothelial differentiation factorSimilar to Endothelial differentiation-related factor 1 (EDF-1) (Multiprotein bridging factor 1) (MBF1). (Os08t0366100-01)
Coordinates
chr8:+:16982279..16985259
Molecular Weight (calculated)
15629.9 Da
IEP (calculated)
10.688
GRAVY (calculated)
-0.840
Length
142 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGIGPIRQD WEPVVVRKKA PTAAAKKDEK AVNAARRSGA EIETMKKYNA GTNKAASSGT SLNTKRLDDD TESLAHERVS SDLKKNLMQA RLDKKMTQAQ
101: LAQMINEKPQ VIQEYESGKA IPNQQIIGKL ERALGTKLRG KK
101: LAQMINEKPQ VIQEYESGKA IPNQQIIGKL ERALGTKLRG KK
001: MAGIGPITQD WEPVVIRKKP ANAAAKRDEK TVNAARRSGA DIETVRKFNA GTNKAASSGT SLNTKMLDDD TENLTHERVP TELKKAIMQA RTDKKLTQSQ
101: LAQIINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
101: LAQIINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK
Arabidopsis Description
MBF1AMBF1A [Source:UniProtKB/TrEMBL;Acc:A0A178VSD5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.