Factsheet for Zm00001d049320_P001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14877	Sorghum	nucleus	97.18	97.18
Zm00001d032359_P002	Maize	extracellular	96.48	96.48
Os08t0366100-01	Rice	extracellular, nucleus, plasma membrane	96.48	96.48
TraesCS2D01G386800.1	Wheat	nucleus	90.14	90.14
TraesCS2B01G407000.1	Wheat	nucleus	90.14	90.14
TraesCS2A01G389000.1	Wheat	nucleus	90.14	90.14
KRH25792	Soybean	nucleus	88.03	88.03
KRH55727	Soybean	nucleus	86.62	86.62
KRH55726	Soybean	nucleus	86.62	86.62
GSMUA_Achr1P04810_001	Banana	nucleus	85.92	85.92
AT2G42680.1	Thale cress	nucleus	83.8	83.8
CDX88998	Canola	nucleus	83.1	83.1
GSMUA_Achr9P00250_001	Banana	nucleus	83.1	83.1
GSMUA_Achr1P11510_001	Banana	nucleus	83.1	83.1
AT3G58680.1	Thale cress	nucleus	82.39	82.39
VIT_19s0014g01260.t01	Wine grape	nucleus	82.39	82.39
Bra000272.1-P	Field mustard	nucleus	82.39	82.39
CDY42821	Canola	nucleus	82.39	82.39
CDX98319	Canola	nucleus	82.39	82.39
CDX83520	Canola	nucleus	82.39	82.39
Bra014559.1-P	Field mustard	nucleus	82.39	82.39
Solyc10g007350.2.1	Tomato	nucleus	80.28	82.01
CDY00581	Canola	nucleus	81.69	81.69
VIT_12s0028g02020.t01	Wine grape	nucleus	80.99	80.99
Solyc09g055470.1.1	Tomato	nucleus	78.87	80.58
Solyc12g014290.1.1	Tomato	nucleus	78.17	79.86
CDY50816	Canola	nucleus	79.58	79.58
Bra004725.1-P	Field mustard	nucleus	79.58	79.58
CDX79844	Canola	nucleus	79.58	79.58
Solyc07g062400.2.1	Tomato	nucleus	77.46	78.57
Bra007411.1-P	Field mustard	nucleus	62.68	78.07
CDY52458	Canola	nucleus	58.45	70.94
CDY49243	Canola	cytosol	80.28	67.46
HORVU2Hr1G092600.4	Barley	extracellular, nucleus	88.73	56.25
Zm00001d046471_P001	Maize	nucleus, plastid	39.44	35.22
PGSC0003DMT400054878	Potato	nucleus	26.76	26.39

Protein Annotations

Gene3D:1.10.260.40	EntrezGene:100273208	MapMan:35.1	ProteinID:AQK50035.1	UniProt:B4FI06	EMBL:BT036744
ncoils:Coil	InterPro:Cro/C1-type_HTH	GO:GO:0003674	GO:GO:0003676	GO:GO:0003677	GO:GO:0005488
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	GO:GO:0043565	InterPro:IPR001387	EMBL:KJ727832
InterPro:Lambda_DNA-bd_dom_sf	InterPro:MBF1_N	PFAM:PF01381	PFAM:PF08523	PFscan:PS50943	PANTHER:PTHR10245
PANTHER:PTHR10245:SF101	SMART:SM00530	SUPFAM:SSF47413	UniParc:UPI00017B6E67	EnsemblPlantsGene:Zm00001d049320	EnsemblPlants:Zm00001d049320_P001
EnsemblPlants:Zm00001d049320_T001	:	:	:	:	:

Description

multi-protein bridging factor homolog1 multi-protein bridging factor homolog1

Coordinates

chr4:+:26180699..26183398

Molecular Weight (calculated)

15663.0 Da

IEP (calculated)

10.757

GRAVY (calculated)

-0.804

Length

142 amino acids

Sequence
(BLAST)

001: MAGIGPIRQD WEPVVVRKKA PTAAAKKDEK AVNAARRSGA EIETMKKFNA GMNKAASSGT SLNTKRLDDD TENLAHERVP SDLKKNLMQA RLDKKLTQAQ
101: LAQMINEKPQ VIQEYESGKA IPNQQIIGKL ERALGTKLRG KK

Best Arabidopsis Sequence Match ( AT2G42680.1 )
(BLAST)

001: MAGIGPITQD WEPVVIRKKP ANAAAKRDEK TVNAARRSGA DIETVRKFNA GTNKAASSGT SLNTKMLDDD TENLTHERVP TELKKAIMQA RTDKKLTQSQ
101: LAQIINEKPQ VIQEYESGKA IPNQQILSKL ERALGAKLRG KK

Arabidopsis Description

MBF1AMBF1A [Source:UniProtKB/TrEMBL;Acc:A0A178VSD5]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.