Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||
|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G332000.1 | Wheat | plasma membrane | 94.59 | 71.67 |
| TraesCS3A01G304500.1 | Wheat | cytosol, peroxisome, plasma membrane | 92.57 | 70.5 |
| TraesCS3D01G297400.1 | Wheat | plasma membrane | 92.34 | 70.21 |
| EES03649 | Sorghum | cytosol, peroxisome, plasma membrane | 70.95 | 54.69 |
| Os01t0761400-01 | Rice | plasma membrane | 68.47 | 52.96 |
| Zm00001d043375_P001 | Maize | plasma membrane | 69.82 | 48.51 |
| HORVU4Hr1G004460.1 | Barley | cytosol, peroxisome, plasma membrane | 37.16 | 27.45 |
| HORVU3Hr1G073580.1 | Barley | plasma membrane | 37.61 | 26.63 |
| HORVU1Hr1G063460.2 | Barley | plasma membrane | 35.14 | 26.4 |
| HORVU5Hr1G000800.3 | Barley | cytosol, peroxisome, plasma membrane | 35.59 | 26.16 |
| HORVU1Hr1G063420.2 | Barley | cytosol, nucleus, plasma membrane | 35.14 | 25.87 |
| HORVU1Hr1G063470.10 | Barley | peroxisome | 34.91 | 25.79 |
| HORVU7Hr1G018540.1 | Barley | cytosol, nucleus, plasma membrane | 34.23 | 24.76 |
| HORVU7Hr1G042120.1 | Barley | cytosol | 34.01 | 24.47 |
| HORVU3Hr1G092870.1 | Barley | plasma membrane | 31.31 | 22.94 |
| HORVU2Hr1G006820.2 | Barley | golgi, plasma membrane | 34.91 | 22.59 |
| HORVU7Hr1G025680.3 | Barley | plasma membrane | 28.38 | 22.11 |
| HORVU5Hr1G047970.5 | Barley | mitochondrion | 29.73 | 21.96 |
| HORVU7Hr1G025670.1 | Barley | plasma membrane | 26.8 | 20.99 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G073520.3 | EnsemblPlantsGene:HORVU3Hr1G073520 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_trans_sf | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF111 | PFAM:PF00854 | SEG:seg |
| SUPFAM:SSF103473 | TMHMM:TMhelix | MapMan:24.2.2.9 | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:553834310..553836072
Molecular Weight (calculated)
47051.6 Da
IEP (calculated)
10.071
GRAVY (calculated)
0.156
Length
444 amino acids
Sequence
(BLAST)
(BLAST)
001: METQEGGAHS SESDARKLEG RGGFVALPFI IANEMLEKVA GFGLNTNMIM YLTKQYHLSN VTAAATLFVW AAAANFAPIP GALIADMYTG RFMAISLGSI
101: ACLTGIVFLW LSAMIPGARP PPCGVGLAGE QCAPPGPRHL AWLIAGFTFL SIGAGGIRPC SMAFGADQFS RHPKERRSRI LQAYFNAYYA SIGVAFTVAV
201: TVIVYVQDNV GWKAGFAVPM GLMMLSAVSF LLGSRLYVKE KGSKQMFAGI GAALVAAIRN HRAQLPAKTE DGVYHHLKDC KLTVPTHKLR FLNKACMISN
301: TGNEEGNGAA GSERDGNGGG RRLCTVDQVE QLKSAVRILP IWSSTVFLAQ AMSQNYAVLQ ANEMDRRIGV GQFRVPGCSL TMFNMVTMSL WSGSYDRWIA
401: PALRRVTGDP RGLTMKQRVG VGLLLATAXX XXXXVKXTEK QKLA
101: ACLTGIVFLW LSAMIPGARP PPCGVGLAGE QCAPPGPRHL AWLIAGFTFL SIGAGGIRPC SMAFGADQFS RHPKERRSRI LQAYFNAYYA SIGVAFTVAV
201: TVIVYVQDNV GWKAGFAVPM GLMMLSAVSF LLGSRLYVKE KGSKQMFAGI GAALVAAIRN HRAQLPAKTE DGVYHHLKDC KLTVPTHKLR FLNKACMISN
301: TGNEEGNGAA GSERDGNGGG RRLCTVDQVE QLKSAVRILP IWSSTVFLAQ AMSQNYAVLQ ANEMDRRIGV GQFRVPGCSL TMFNMVTMSL WSGSYDRWIA
401: PALRRVTGDP RGLTMKQRVG VGLLLATAXX XXXXVKXTEK QKLA
001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
Arabidopsis Description
NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.