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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • golgi 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane
MultiLoc:golgi
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G020500.1 Wheat plasma membrane 91.4 91.73
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 91.05 91.37
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 90.35 90.51
HORVU7Hr1G025670.1 Barley plasma membrane 89.47 89.95
Os05t0338900-00 Rice plasma membrane 27.02 75.12
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 73.33 72.19
GSMUA_Achr6P15780_001 Banana plasma membrane 47.54 54.31
GSMUA_Achr10P... Banana plasma membrane 44.21 52.83
VIT_06s0004g03530.t01 Wine grape plasma membrane 46.32 45.75
VIT_06s0004g03520.t01 Wine grape plasma membrane 45.96 45.41
PGSC0003DMT400016889 Potato plasma membrane 43.51 44.93
HORVU5Hr1G047970.5 Barley mitochondrion 47.37 44.93
Solyc06g075480.2.1 Tomato plasma membrane 43.51 44.77
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 16.32 44.71
PGSC0003DMT400019426 Potato plasma membrane 42.98 44.3
Solyc06g075500.2.1 Tomato plasma membrane 42.11 44.2
PGSC0003DMT400019424 Potato mitochondrion 25.96 44.05
PGSC0003DMT400019420 Potato plasma membrane 41.75 43.59
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 15.96 43.54
KRH22952 Soybean plasma membrane 41.23 43.44
Solyc06g075490.1.1 Tomato plasma membrane 41.4 42.99
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 41.05 42.86
Bra033836.1-P Field mustard plasma membrane 38.6 42.15
AT3G45680.1 Thale cress plasma membrane 41.23 42.11
CDX99152 Canola plasma membrane 41.05 42.01
PGSC0003DMT400065310 Potato plasma membrane 40.88 41.98
CDY12696 Canola plasma membrane 37.72 41.59
PGSC0003DMT400019419 Potato plasma membrane 36.84 41.5
Solyc11g072580.1.1 Tomato plasma membrane 39.82 41.35
Bra033955.1-P Field mustard plasma membrane 39.65 41.17
Solyc06g075440.1.1 Tomato plasma membrane 38.25 41.05
AT3G45650.2 Thale cress plasma membrane 41.93 40.92
AT3G45700.1 Thale cress plasma membrane 39.3 40.88
CDX81495 Canola plasma membrane 37.19 40.85
CDY48147 Canola plasma membrane 39.12 40.47
AT3G45720.1 Thale cress plasma membrane 39.12 40.18
Solyc11g072570.1.1 Tomato plasma membrane 39.3 40.07
CDY18499 Canola plasma membrane 39.12 40.04
Bra021295.1-P Field mustard plasma membrane 39.12 40.04
PGSC0003DMT400065303 Potato plasma membrane 36.84 39.92
AT3G45690.1 Thale cress plasma membrane 36.14 39.92
AT3G45660.2 Thale cress plasma membrane 40.35 39.79
CDX86030 Canola plasma membrane 18.95 39.71
CDX99151 Canola plasma membrane 38.6 39.64
AT3G45710.1 Thale cress plasma membrane 38.25 38.93
Solyc11g072560.1.1 Tomato plasma membrane 34.56 38.33
CDX86031 Canola plasma membrane 9.82 36.13
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 33.16 31.29
HORVU7Hr1G042120.1 Barley cytosol 33.51 30.96
HORVU1Hr1G063420.2 Barley cytosol, nucleus, plasma membrane 32.28 30.51
HORVU1Hr1G063460.2 Barley plasma membrane 31.4 30.29
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 32.11 29.8
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 31.4 29.78
HORVU1Hr1G063470.10 Barley peroxisome 30.88 29.28
HORVU3Hr1G092870.1 Barley plasma membrane 30.18 28.38
HORVU3Hr1G073520.3 Barley cytosol 22.11 28.38
HORVU3Hr1G073580.1 Barley plasma membrane 29.47 26.79
PGSC0003DMT400016891 Potato plasma membrane 21.23 25.37
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 30.18 25.07
Bra038280.1-P Field mustard plasma membrane 38.77 19.79
Protein Annotations
EnsemblPlants:HORVU7Hr1G025680.3EnsemblPlantsGene:HORVU7Hr1G025680Gene3D:1.20.1250.20GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF19PFAM:PF00854SEG:seg
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000B46E5BDUniProt:A0A287VRU9MapMan:24.2.2.9:
Description
No Description!
Coordinates
chrchr7H:-:42783686..42786918
Molecular Weight (calculated)
60403.5 Da
IEP (calculated)
7.937
GRAVY (calculated)
0.515
Length
570 amino acids
Sequence
(BLAST)
001: MEATGSQQEE PRRLSSGDHE SLKDPGNGKG GWITFPFLAV AILSLGLAAS GATGNMVVYL ITKYNVPSVD AAQISTIISG SISVAPVAGA IVADAFFGCY
101: PVVAVAMIMA VLSLVVFTLT ASLPGLRPAA CHFGAGPCEQ ASTGQMAALY AGVFLLCLSA AGARFNQATM GANQFEAAAD RDVFFNWYFI FFYASSVLGA
201: TVIVYLQDTL SWTLGFGVSC AASVVGLAAL LLGSRYYRQP AAQGSPFTGI ARVVVAAARK RKVSVVAPGE LKFYYGLRSG GDDDSKTGGD CGVPPSDSFS
301: SFLNRAAVIT DGDVDGTSGS VLRPWRVCTV HQVEDFKTVL RILPIWSAAI VLSIAIGVQI NFTVLQALVM DRAVGPFTVP AGSMIVGTLI SVVIFLGLLD
401: RVLLPLWRRL TGHTPTPLQC VGAGHALTVL SMAASALIER ERTATVRAHG EEGNPAWVSP LSAMWLVLPF AVAGAGEALH FPAQVTLYYQ EFPPSLKNTA
501: TGMMAMIVAL GFYLSTALVN IVQRATTWLP DNMNASKLEN LYWLLTLLVA LNFGYFLTCA KLYRYQNIGK
Best Arabidopsis Sequence Match ( AT3G45680.1 )
(BLAST)
001: MASLVSGDKE AQISGDPGSK RGGWITFPFM LATLLGLSVT SFGWVMNLIV FLIEEFNIKS IAAAQISNVA NGCLSMLPVV AAILADSFFG NIPVIAASSF
101: ISLLGIVLLT LIASLDYLRP RPCEAGSVLC TPPSKLHLGI LYTALALVTT GAGGTRFTMA SAGANQYEKP KEQGSFFNWY FLTLYAGAIT GATAIVYIQD
201: NASWKLGFGL CAAANLISFI VFVSGKRYYK HDKPMGSPFT SLIRVVVSAT VKRKAVISCN EEDYHHYGLE KEVKTSAAMP SKSFRFLNRA ALMTKDDLNQ
301: KEGSVNNIWR LCSVQEVEDF KAILRVFPLW LSIIFVSTPM VMQTSLIVLQ ALVTDRGLGP NFKVPAGSLQ VIIIITACIV IIMNNWLVFP MYKKLTHKLL
401: TPLQKVGIGQ VLTILSMALS AVVEAKRLKT VENGHPMSVL WLFPPLVIVG IGEAFQFPAN IELFYGEFPE SLRNTATSLT SVVIGISFYL STALIDLIQR
501: TTAWLPNDIN HGRVDNVYWL LVIGGILNFG YFLVCSWVYK YRNLKDNDQE QDPKDGTM
Arabidopsis Description
NPF2.3Protein NRT1/ PTR FAMILY 2.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M175]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.