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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra021295.1-P Field mustard plasma membrane 99.1 99.1
CDY12696 Canola plasma membrane 82.94 89.36
CDX81495 Canola plasma membrane 82.59 88.63
AT3G45680.1 Thale cress plasma membrane 81.51 81.36
AT3G45690.1 Thale cress plasma membrane 70.2 75.78
AT3G45700.1 Thale cress plasma membrane 73.61 74.82
AT3G45710.1 Thale cress plasma membrane 75.04 74.64
CDX99151 Canola plasma membrane 73.61 73.87
CDX86031 Canola plasma membrane 19.21 69.03
CDX99152 Canola plasma membrane 64.45 64.45
CDX86030 Canola plasma membrane 30.16 61.76
CDY48147 Canola plasma membrane 60.86 61.52
PGSC0003DMT400056834 Potato endoplasmic reticulum, plasma membrane 19.21 51.44
Solyc06g075500.2.1 Tomato plasma membrane 49.91 51.2
PGSC0003DMT400019427 Potato endoplasmic reticulum, plasma membrane 19.21 51.2
PGSC0003DMT400016889 Potato plasma membrane 50.63 51.09
Solyc06g075490.1.1 Tomato plasma membrane 50.27 51.0
PGSC0003DMT400019426 Potato plasma membrane 50.27 50.63
PGSC0003DMT400019420 Potato plasma membrane 49.01 50.0
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 49.01 50.0
Solyc06g075480.2.1 Tomato plasma membrane 49.37 49.64
VIT_06s0004g03520.t01 Wine grape plasma membrane 50.99 49.22
PGSC0003DMT400019424 Potato mitochondrion 29.62 49.11
VIT_06s0004g03530.t01 Wine grape plasma membrane 50.81 49.05
KRH22952 Soybean plasma membrane 47.58 48.98
PGSC0003DMT400065310 Potato plasma membrane 48.65 48.83
Solyc11g072580.1.1 Tomato plasma membrane 47.76 48.45
PGSC0003DMT400065303 Potato plasma membrane 45.42 48.1
Solyc06g075440.1.1 Tomato plasma membrane 44.17 46.33
Solyc11g072570.1.1 Tomato plasma membrane 46.32 46.15
PGSC0003DMT400019419 Potato plasma membrane 41.83 46.05
Solyc11g072560.1.1 Tomato plasma membrane 42.19 45.72
TraesCS4A01G440700.1 Wheat plasma membrane 43.63 43.47
TraesCS7D01G049400.1 Wheat plasma membrane 43.63 43.39
TraesCS7A01G054100.1 Wheat plasma membrane 43.63 43.32
TraesCS5B01G152000.1 Wheat plasma membrane 43.63 42.71
TraesCS4A01G440400.1 Wheat plasma membrane 41.83 42.29
TraesCS7A01G054000.2 Wheat plasma membrane 41.83 42.29
GSMUA_Achr6P15780_001 Banana plasma membrane 37.88 42.28
GSMUA_Achr10P... Banana plasma membrane 36.09 42.14
TraesCS7D01G049300.1 Wheat plasma membrane 41.65 42.11
TraesCS5D01G158500.1 Wheat plasma membrane 43.09 41.96
TraesCS4A01G440500.1 Wheat plasma membrane 41.29 41.74
TraesCS4A01G440600.1 Wheat plasma membrane 41.11 41.56
TraesCS5A01G153200.1 Wheat plasma membrane 43.27 41.27
TraesCS4A01G440300.1 Wheat plasma membrane 40.57 41.02
TraesCS7D01G119900.1 Wheat plasma membrane 41.47 40.67
TraesCS7D01G120200.1 Wheat cytosol, plasma membrane, vacuole 41.47 40.67
TraesCS7A01G121700.1 Wheat golgi, peroxisome, plasma membrane 41.47 40.6
TraesCS7B01G020500.1 Wheat plasma membrane 40.93 40.14
TraesCS7D01G119800.1 Wheat plasma membrane 40.04 40.11
HORVU7Hr1G025670.1 Barley plasma membrane 40.75 40.04
HORVU5Hr1G047970.5 Barley mitochondrion 43.09 39.93
Os05t0338900-00 Rice plasma membrane 14.54 39.51
HORVU7Hr1G025680.3 Barley plasma membrane 40.04 39.12
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 39.68 38.17
TraesCS7B01G020300.1 Wheat plasma membrane 40.75 38.15
TraesCS7A01G121600.1 Wheat plastid 37.34 37.61
TraesCS7B01G020200.1 Wheat peroxisome, plasma membrane, vacuole 23.7 34.02
CDY28441 Canola cytosol, peroxisome, plasma membrane 33.39 32.75
CDY40280 Canola plasma membrane 33.21 32.57
CDY25813 Canola cytosol, peroxisome, plasma membrane 33.03 32.39
CDX81902 Canola cytosol, peroxisome, plasma membrane 34.11 32.09
CDY38595 Canola cytosol, peroxisome, plasma membrane 34.11 32.09
CDX83801 Canola cytosol, peroxisome, plasma membrane 33.57 31.64
CDY53067 Canola cytosol, peroxisome, plasma membrane 33.57 31.48
CDY56086 Canola cytosol, peroxisome, plasma membrane 33.39 31.47
CDY48389 Canola cytosol, peroxisome, plasma membrane 34.29 31.47
CDY26715 Canola plasma membrane 32.67 31.38
CDY21692 Canola plasma membrane 32.32 31.36
CDY69402 Canola plasma membrane 16.52 30.87
CDY09846 Canola plasma membrane 23.7 30.77
CDY23545 Canola cytosol, peroxisome, plasma membrane 33.39 30.64
CDY45756 Canola plasma membrane 31.24 30.47
CDY38767 Canola plastid 33.93 30.39
CDY11647 Canola plastid 33.75 30.37
CDY07377 Canola cytosol, peroxisome, plasma membrane 32.5 30.37
CDY28371 Canola plasma membrane 26.39 30.25
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 18.85 30.17
CDY04237 Canola cytosol, peroxisome, plasma membrane 32.14 30.08
CDX96690 Canola plasma membrane 32.67 29.98
CDY30731 Canola plasma membrane 31.96 29.72
CDY65728 Canola cytosol 10.59 29.65
CDY51257 Canola plastid 25.85 29.63
CDY52480 Canola plasma membrane 24.42 29.5
CDY69522 Canola plasma membrane 15.44 29.45
CDX97728 Canola plasma membrane 31.24 29.34
CDY20187 Canola plasma membrane 15.44 29.25
CDY00315 Canola plasma membrane 32.14 29.25
CDY30141 Canola plasma membrane 31.06 29.17
CDY54537 Canola cytosol, peroxisome, plasma membrane 32.32 29.13
CDY69519 Canola plasma membrane 15.26 29.11
CDY70561 Canola plasma membrane 28.37 29.04
CDY11648 Canola plasma membrane 28.73 29.04
CDY38766 Canola plasma membrane 28.73 29.04
CDY51783 Canola cytosol, peroxisome, plasma membrane 31.42 29.02
CDX87266 Canola peroxisome 29.8 28.97
CDX84344 Canola plasma membrane 31.24 28.9
CDY45754 Canola plasma membrane 31.06 28.74
CDY36913 Canola cytosol, peroxisome, plasma membrane 31.42 28.46
CDY16763 Canola peroxisome 29.26 28.4
CDY69433 Canola golgi, peroxisome, plastid 31.96 28.08
CDY67993 Canola plasma membrane 28.01 28.06
CDX68450 Canola cytosol, peroxisome, plasma membrane 30.88 27.97
CDY21805 Canola cytosol, peroxisome, plasma membrane 31.06 27.86
CDX83027 Canola cytosol, peroxisome, plasma membrane 29.98 27.74
CDX86198 Canola peroxisome 28.19 27.59
CDY05592 Canola plasma membrane 28.19 27.45
CDY52504 Canola plasma membrane 28.19 27.45
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 27.47 25.8
CDX96007 Canola cytosol, peroxisome, plasma membrane 29.08 23.41
CDX69747 Canola plasma membrane 28.01 10.09
CDY68532 Canola cytosol 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078FZ80UniProt:A0A078FZ80EnsemblPlants:CDY18499ProteinID:CDY18499
ProteinID:CDY18499.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00005510001
InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF19
InterPro:PTR2_symporter_CSSUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EDD6B5SEG:seg:
Description
BnaA01g26960DBnaA01g26960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZ80]
Coordinates
chrLK032086:+:107399..109293
Molecular Weight (calculated)
61094.7 Da
IEP (calculated)
8.422
GRAVY (calculated)
0.366
Length
557 amino acids
Sequence
(BLAST)
001: MAGPVSDDTE AQYAGDTSSK RGGWITLPFM MATLLGMSIT SFGWVLNLIV FLIEEFNIKN IAAAQISNIV NGCLSMLPLV AAILADSFFG NIVVIWASTF
101: ISLTGILLLT LIAYLDVLKP RPCETGSNLC QSPSELQLGI LYTALVLVTS GAGGTRFTLA SAGANQYEKP KDQGSFFNWY FLTLYAGAIT GATAIVYTQD
201: NASWKLGFGL CAAANLVSFI VFLCGKRVYK HEKPMGSPFK SLISVVVAAT LKRKAVISSN EEDYHLGLGE KDKTSPALPS KSYRFLNRAA LKTEEDLNHK
301: DGSANNIWRL CTVQEVEDFK AILRLVPLWV SIIFVGTPIA MQTSLIVLQA LVMDRGLGPH FKVPAGSLQV VIMISASTFI IMNNWLVYPM YQKITKKRLT
401: PLQKVGIGQV FTILSMVVSA VVEAKRLKSV ENNGHPMSVL WLFPPLVIVG IGEAFHFPGN TELFYGEFPE SLRNTATSLT SLVIGISFYL STALIDLIQR
501: TTKWLPNDIN SGRVDNVYWV LVVAGVLNFG YFLVCSWFYK YRNLGGDNEL DPKDVST
Best Arabidopsis Sequence Match ( AT3G45680.1 )
(BLAST)
001: MASLVSGDKE AQISGDPGSK RGGWITFPFM LATLLGLSVT SFGWVMNLIV FLIEEFNIKS IAAAQISNVA NGCLSMLPVV AAILADSFFG NIPVIAASSF
101: ISLLGIVLLT LIASLDYLRP RPCEAGSVLC TPPSKLHLGI LYTALALVTT GAGGTRFTMA SAGANQYEKP KEQGSFFNWY FLTLYAGAIT GATAIVYIQD
201: NASWKLGFGL CAAANLISFI VFVSGKRYYK HDKPMGSPFT SLIRVVVSAT VKRKAVISCN EEDYHHYGLE KEVKTSAAMP SKSFRFLNRA ALMTKDDLNQ
301: KEGSVNNIWR LCSVQEVEDF KAILRVFPLW LSIIFVSTPM VMQTSLIVLQ ALVTDRGLGP NFKVPAGSLQ VIIIITACIV IIMNNWLVFP MYKKLTHKLL
401: TPLQKVGIGQ VLTILSMALS AVVEAKRLKT VENGHPMSVL WLFPPLVIVG IGEAFQFPAN IELFYGEFPE SLRNTATSLT SVVIGISFYL STALIDLIQR
501: TTAWLPNDIN HGRVDNVYWL LVIGGILNFG YFLVCSWVYK YRNLKDNDQE QDPKDGTM
Arabidopsis Description
NPF2.3Protein NRT1/ PTR FAMILY 2.3 [Source:UniProtKB/Swiss-Prot;Acc:Q9M175]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.