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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra007886.1-P Field mustard cytosol, peroxisome, plasma membrane 99.83 99.83
CDY53067 Canola cytosol, peroxisome, plasma membrane 98.82 98.32
CDY38767 Canola plastid 94.75 90.03
CDY11647 Canola plastid 93.74 89.5
CDY48389 Canola cytosol, peroxisome, plasma membrane 88.16 85.83
CDY23545 Canola cytosol, peroxisome, plasma membrane 87.82 85.5
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 87.48 83.39
CDY40280 Canola plasma membrane 66.5 69.19
CDY25813 Canola cytosol, peroxisome, plasma membrane 66.33 69.01
CDY28441 Canola cytosol, peroxisome, plasma membrane 66.16 68.84
KRH74756 Soybean plastid 61.59 58.71
VIT_01s0026g01490.t01 Wine grape plastid 59.9 57.19
KRH69380 Soybean plastid 60.74 57.07
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 59.56 56.59
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 55.33 53.96
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 54.65 53.21
GSMUA_Achr4P17590_001 Banana plasma membrane 37.73 49.89
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 39.59 48.15
CDY38766 Canola plasma membrane 44.16 47.37
Os01t0913300-01 Rice plasma membrane 47.55 46.83
CDY11648 Canola plasma membrane 43.65 46.82
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 43.82 45.52
HORVU3Hr1G092870.1 Barley plasma membrane 46.19 45.05
CDY45756 Canola plasma membrane 43.15 44.66
TraesCS3D01G414400.1 Wheat plasma membrane 45.52 44.61
TraesCS3B01G454100.1 Wheat plasma membrane 45.52 44.46
CDY09846 Canola plasma membrane 31.98 44.06
TraesCS3B01G454000.1 Wheat plasma membrane 45.35 44.01
TraesCS3A01G418700.1 Wheat plasma membrane 45.18 43.99
TraesCS3D01G414300.1 Wheat plasma membrane 45.18 43.99
CDY00315 Canola plasma membrane 45.01 43.46
CDY30731 Canola plasma membrane 43.99 43.41
TraesCS3A01G418800.1 Wheat plasma membrane 45.52 43.25
CDX84344 Canola plasma membrane 43.99 43.19
CDY26715 Canola plasma membrane 42.3 43.1
CDX68450 Canola cytosol, peroxisome, plasma membrane 44.67 42.93
CDY51783 Canola cytosol, peroxisome, plasma membrane 43.49 42.62
CDX81902 Canola cytosol, peroxisome, plasma membrane 42.47 42.4
CDY45754 Canola plasma membrane 43.15 42.36
CDY21692 Canola plasma membrane 41.12 42.33
CDY36913 Canola cytosol, peroxisome, plasma membrane 43.99 42.28
CDX83027 Canola cytosol, peroxisome, plasma membrane 42.98 42.19
CDX83801 Canola cytosol, peroxisome, plasma membrane 41.79 41.79
CDY69433 Canola golgi, peroxisome, plastid 43.82 40.85
CDY21805 Canola cytosol, peroxisome, plasma membrane 42.64 40.58
CDY16763 Canola peroxisome 39.09 40.24
CDX96690 Canola plasma membrane 41.29 40.2
CDX87266 Canola peroxisome 38.92 40.14
CDY69519 Canola plasma membrane 19.46 39.38
CDY69522 Canola plasma membrane 19.46 39.38
CDY52480 Canola plasma membrane 30.63 39.26
CDX86198 Canola peroxisome 37.73 39.19
CDY52504 Canola plasma membrane 37.73 38.99
CDY05592 Canola plasma membrane 37.73 38.99
CDY38595 Canola cytosol, peroxisome, plasma membrane 38.92 38.85
CDY20187 Canola plasma membrane 19.29 38.78
KXG37624 Sorghum plasma membrane 38.75 37.85
CDY07377 Canola cytosol, peroxisome, plasma membrane 37.9 37.58
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 37.56 37.44
CDY04237 Canola cytosol, peroxisome, plasma membrane 37.56 37.31
CDY28371 Canola plasma membrane 30.46 37.04
CDY70561 Canola plasma membrane 34.01 36.95
CDY30141 Canola plasma membrane 36.89 36.76
CDX97728 Canola plasma membrane 36.72 36.59
CDY51257 Canola plastid 29.95 36.42
CDY54537 Canola cytosol, peroxisome, plasma membrane 38.07 36.41
Os04t0660900-01 Rice plasma membrane, plastid 38.41 35.97
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 21.15 35.92
EES13016 Sorghum cytosol, nucleus, plasma membrane 38.75 35.84
CDY65728 Canola cytosol 12.01 35.68
CDY69402 Canola plasma membrane 17.43 34.56
CDX99152 Canola plasma membrane 32.49 34.47
Zm00001d001976_P001 Maize plastid 38.58 34.03
CDX81495 Canola plasma membrane 29.61 33.72
CDY12696 Canola plasma membrane 29.44 33.66
CDY18499 Canola plasma membrane 31.47 33.39
CDY67993 Canola plasma membrane 29.78 31.65
CDX86030 Canola plasma membrane 14.38 31.25
CDY48147 Canola plasma membrane 28.76 30.85
CDX99151 Canola plasma membrane 28.6 30.45
CDX86031 Canola plasma membrane 7.78 29.68
CDX96007 Canola cytosol, peroxisome, plasma membrane 32.15 27.46
CDX69747 Canola plasma membrane 30.46 11.64
CDY68532 Canola cytosol 0.34 0.37
Protein Annotations
MapMan:24.2.2.9GO:A0A078IZT8UniProt:A0A078IZT8EnsemblPlants:CDY56086ProteinID:CDY56086ProteinID:CDY56086.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00017806001InterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF20SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EF2867
SEG:seg:::::
Description
BnaA02g35730DBnaA02g35730D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZT8]
Coordinates
chrLK033456:+:35092..42140
Molecular Weight (calculated)
65338.7 Da
IEP (calculated)
8.355
GRAVY (calculated)
0.271
Length
591 amino acids
Sequence
(BLAST)
001: MDVSDSHSQK SSILDAEKVE KKPGGWRAVT FILGNETLER LGTIGLLSNF MVYLTRVFHL EQVDASNVIN IWSGFSNLTP LVGAFISDAY VGRFKTIAFA
101: SFATLLGLVT LTLTASLPQL HPETCNSKDP VSCGGPNKLQ FGILLLGLGF LSIGSGGIRP CSIPFGVDQF DQRTEEGIKG VASFFNWYYM TFTVVLLITQ
201: TVVVYIQDQV SWIIGFSVPT GLMACAVVMF FAGMKLYVYV KPEGSIFSGI AQVVVAARKK RKMKLPAEDD GTVTYYDPPV KDSVLSKLHH SNQYRFLDKA
301: AVIIEGDLSS EGVPANKWRL CSIQEVEEVK CLIRIVPVWS AGIISLAAMT QQGTFTVSQA LKMDRHIGPN FEIPAGSLSV ISLLTIGVFL PLYDRVLVPF
401: FRRITGHKSG ITLLQRIGTG IVFAILSMIV AGLVERMRRT RSINAGDSTG MTPMSVFWLS PQLILMGLCE AFNIIGQIEF FNSQFPEHMR SIANSLFSLS
501: FAGSNYLSSL IVTTVHKFSG GHDRPDWLNK NLNAGKLDYF YYLIAVLGVF NLVYFWYCAQ GYRYKVGLQM GGFEEDESFS DVEMSSKKQL K
Best Arabidopsis Sequence Match ( AT1G69870.1 )
(BLAST)
001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
Arabidopsis Description
NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.