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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • plastid 1
  • cytosol 1
  • mitochondrion 1
  • plasma membrane 1
  • nucleus 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, nucleus, plasma membrane
Any Predictor:cytosol, nucleus, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d001976_P001 Maize plastid 84.98 81.04
KXG37624 Sorghum plasma membrane 71.05 75.04
Os04t0660900-01 Rice plasma membrane, plastid 66.51 67.35
CDY40280 Canola plasma membrane 35.84 40.32
CDY25813 Canola cytosol, peroxisome, plasma membrane 35.52 39.96
VIT_01s0026g01490.t01 Wine grape plastid 38.65 39.9
CDY28441 Canola cytosol, peroxisome, plasma membrane 35.37 39.79
Bra012429.1-P Field mustard cytosol, peroxisome, plasma membrane 35.05 39.44
KRH74756 Soybean plastid 38.18 39.35
AT1G27080.1 Thale cress cytosol, golgi, plasma membrane 35.37 39.24
CDY56086 Canola cytosol, peroxisome, plasma membrane 35.84 38.75
Bra007886.1-P Field mustard cytosol, peroxisome, plasma membrane 35.84 38.75
CDY53067 Canola cytosol, peroxisome, plasma membrane 35.84 38.55
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 36.46 38.45
KRH69380 Soybean plastid 37.72 38.31
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 36.31 38.22
CDY48389 Canola cytosol, peroxisome, plasma membrane 35.99 37.89
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 36.62 37.74
CDY11647 Canola plastid 36.46 37.64
CDY38767 Canola plastid 36.46 37.46
Bra016259.1-P Field mustard plastid 36.46 37.46
CDY23545 Canola cytosol, peroxisome, plasma membrane 35.52 37.4
EER91066 Sorghum cytosol, peroxisome, plasma membrane 34.27 36.93
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 35.84 36.82
KRG99182 Soybean plasma membrane 33.02 36.76
CDY38766 Canola plasma membrane 31.61 36.66
CDY11648 Canola plasma membrane 31.61 36.66
Bra016260.1-P Field mustard plasma membrane 31.46 36.48
EES16414 Sorghum cytosol, peroxisome, plasma membrane 33.8 36.18
EER98133 Sorghum plasma membrane 36.46 35.79
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 33.18 35.69
AT1G69860.1 Thale cress plasma membrane 30.83 35.5
EES19523 Sorghum plasma membrane 33.65 35.42
EES18230 Sorghum cytosol 33.96 35.4
EER88193 Sorghum cytosol, golgi, peroxisome 32.55 34.96
EES19524 Sorghum cytosol, peroxisome, plasma membrane 31.77 33.89
EER89657 Sorghum cytosol, peroxisome, plasma membrane 31.77 33.89
EES18229 Sorghum plastid 33.33 33.76
Bra003979.1-P Field mustard cytosol, peroxisome, plasma membrane 18.15 33.72
OQU78006 Sorghum cytosol 30.99 32.95
EES03650 Sorghum plasma membrane 28.48 31.27
EES03649 Sorghum cytosol, peroxisome, plasma membrane 27.7 30.73
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 27.23 30.05
OQU83363 Sorghum plasma membrane 26.13 29.14
OQU80662 Sorghum plasma membrane 22.69 27.67
Protein Annotations
MapMan:24.2.2.9UniProt:C5Y9L2EnsemblPlants:EES13016ProteinID:EES13016ProteinID:EES13016.2GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021
GO:GO:0022857GO:GO:0055085InterPro:IPR020846InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF156EnsemblPlantsGene:SORBI_3006G251200SUPFAM:SSF103473TMHMM:TMhelix
UniParc:UPI00081AB497SEG:seg::::
Description
hypothetical protein
Coordinates
chr6:-:58979449..58981901
Molecular Weight (calculated)
68983.3 Da
IEP (calculated)
9.431
GRAVY (calculated)
0.232
Length
639 amino acids
Sequence
(BLAST)
001: MHSRHFKHNT IPAAFSDRAS EGGRPEAASM ASRRGPPEPE QEAAGGGGGG AEATRRRPSG WRAVAFIIGV YAAAYIAGNA FSFSLTSYLI DRYNMKQNAA
101: TNVNNIFSGT FNFAPVVGAF VADAFWGRFR TLLFGTVVGV AAMAVITLSA TIHQLKPPPC SPVAQQAGTC VSPSGLQRAV LYLGMGLLVV SAGGMNPTSL
201: PFGADQFDER KEQHKGGLTR FYNWYYAVAM IATFLALTVV LYVQVNVSWG LGFAIPTALM AVAFVVFLVG TKMYVYVPPE GSIFSSVARV FVASCRKWRL
301: PLPHPDDARR QEELLYNAPS AVGNGRRVFR LPLTLQLSFL NKAAIVTDAD EEIRPDGSPA RPWKLCSVQQ VEEAKCLLKI IPVWISGTLW FTVVTELINY
401: TFLQASTMDL HMGKHFTIPP ASIVAVLYLS VALFVPVYDL LIARAAHRVT KAGRGITLLQ RQGAGLVVGA LAFVVAAAVE RRRRRSAVAH GDGMSPLSVF
501: VLAPQLAVMG VSGAFSMVGQ TEFYNTQFPD QMRTLANAAF YCAQGISSYL ATLVVNIVNA RTRQHGGSAG WVADDINAGR IDYFYYAMAV LTGANFVYFL
601: VCSHFYQYKG EQAADTLGGH EPATDSGSIS ESEAALLKT
Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)
001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV
Arabidopsis Description
NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.