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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d031213_P001 Maize plasma membrane 75.71 88.8
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 87.94 88.38
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 66.67 65.89
Os12t0638300-01 Rice extracellular, plasma membrane 63.82 64.91
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 66.5 64.87
TraesCS2B01G057700.1 Wheat plasma membrane 64.99 64.77
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 66.0 64.48
TraesCS2A01G045500.1 Wheat plasma membrane 64.66 64.44
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 65.49 64.42
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 66.33 64.29
TraesCS2D01G044200.1 Wheat plasma membrane 64.49 64.27
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 66.0 64.17
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 62.48 63.44
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 64.99 63.19
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 65.16 62.95
TraesCS2D01G044000.1 Wheat plasma membrane 62.81 62.29
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 62.98 62.15
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 63.82 55.54
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 51.93 55.36
GSMUA_Achr5P15030_001 Banana cytosol 42.55 53.59
EER91066 Sorghum cytosol, peroxisome, plasma membrane 53.1 53.46
VIT_14s0066g02590.t01 Wine grape plasma membrane 50.59 51.62
PGSC0003DMT400065197 Potato mitochondrion 48.91 49.91
Solyc03g113430.2.1 Tomato plasma membrane 48.74 49.74
Solyc03g113420.2.1 Tomato plasma membrane 48.41 49.23
PGSC0003DMT400065196 Potato plasma membrane 48.41 48.9
Solyc06g071570.2.1 Tomato plasma membrane 47.07 48.62
PGSC0003DMT400069660 Potato plasma membrane 46.9 48.44
KRH56968 Soybean plasma membrane 48.07 48.15
KRH56970 Soybean cytosol, peroxisome, plasma membrane 47.4 47.4
KRH03408 Soybean cytosol, peroxisome, plasma membrane 46.9 47.3
Bra035886.1-P Field mustard plasma membrane 39.36 47.28
KRH03409 Soybean plasma membrane 48.07 46.9
KRH03412 Soybean plasma membrane 45.73 46.59
EER98133 Sorghum plasma membrane 50.75 46.54
KRH56969 Soybean plasma membrane 47.57 46.48
CDY09846 Canola plasma membrane 33.33 46.39
CDY45756 Canola plasma membrane 44.05 46.06
CDX83801 Canola cytosol, peroxisome, plasma membrane 45.56 46.02
Bra025695.1-P Field mustard plasma membrane 44.56 45.86
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 45.06 45.83
CDX81902 Canola cytosol, peroxisome, plasma membrane 45.39 45.78
CDY26715 Canola plasma membrane 44.39 45.69
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 45.23 45.61
CDY21692 Canola plasma membrane 43.55 45.3
CDY30731 Canola plasma membrane 45.06 44.91
Bra029248.1-P Field mustard plasma membrane 45.73 44.61
Bra035885.1-P Field mustard peroxisome 42.04 44.5
CDY45754 Canola plasma membrane 44.72 44.35
CDX84344 Canola plasma membrane 44.56 44.19
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 45.56 44.16
CDY00315 Canola plasma membrane 45.23 44.12
Bra010111.1-P Field mustard plasma membrane 45.23 44.12
CDY16763 Canola peroxisome 42.38 44.08
CDX87266 Canola peroxisome 42.04 43.8
CDX96690 Canola plasma membrane 44.39 43.66
CDY51783 Canola cytosol, peroxisome, plasma membrane 43.38 42.95
Bra019521.1-P Field mustard plasma membrane 43.72 42.72
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 43.89 42.6
CDY36913 Canola cytosol, peroxisome, plasma membrane 43.89 42.6
CDX68450 Canola cytosol, peroxisome, plasma membrane 43.89 42.6
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 43.89 42.6
CDX83027 Canola cytosol, peroxisome, plasma membrane 42.88 42.52
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 21.44 42.24
AT3G47960.1 Thale cress plasma membrane 44.89 42.14
CDY21805 Canola cytosol, peroxisome, plasma membrane 43.05 41.38
CDY69433 Canola golgi, peroxisome, plastid 43.55 41.01
EER88193 Sorghum cytosol, golgi, peroxisome 39.03 39.16
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 38.86 39.12
EES03650 Sorghum plasma membrane 35.34 36.25
EES19524 Sorghum cytosol, peroxisome, plasma membrane 35.34 35.23
EES03649 Sorghum cytosol, peroxisome, plasma membrane 33.84 35.07
EES18230 Sorghum cytosol 35.85 34.91
KXG37624 Sorghum plasma membrane 35.34 34.88
EER89657 Sorghum cytosol, peroxisome, plasma membrane 34.51 34.39
OQU78006 Sorghum cytosol 34.51 34.28
EES19523 Sorghum plasma membrane 34.67 34.1
EES13016 Sorghum cytosol, nucleus, plasma membrane 36.18 33.8
EES18229 Sorghum plastid 35.34 33.44
OQU80662 Sorghum plasma membrane 27.64 31.49
KXG21716 Sorghum cytosol, peroxisome, plasma membrane 30.49 31.43
OQU83363 Sorghum plasma membrane 30.15 31.41
Bra016534.1-P Field mustard plastid 45.56 26.36
VIT_17s0000g05550.t01 Wine grape plasma membrane 49.08 17.09
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9EntrezGene:8086108UniProt:C5YSI2EnsemblPlants:EES16414ProteinID:EES16414
ProteinID:EES16414.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846InterPro:MFS_dom
InterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59EnsemblPlantsGene:SORBI_3008G180300
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0001A88200RefSeq:XP_002442576.1SEG:seg:
Description
hypothetical protein
Coordinates
chr8:+:61383642..61385999
Molecular Weight (calculated)
64647.3 Da
IEP (calculated)
8.003
GRAVY (calculated)
0.244
Length
597 amino acids
Sequence
(BLAST)
001: MAQQHDKAST FAAAQEMATT TKTKQQLSDD ESDAGEPEEN YRGWKSMPYV IGNETCEKLG TIGTTANLLV YLTTVYGMTG ASAATLLNLW SGTVSMAPLL
101: GAFLSDSYLG RYTTIAFASV ASFLGMIILT LTAAVPSLHP NDPTAGAPHP NNGPSSLQMA VLLASFALLA VGAGGIRPCN LAFGADQFDP RTPAGRRGIN
201: SFFNWYYFTF TIAMMISATV IIYLQSDVNW ALGLAVPATL MGVSCVLFFM GTRLYVRVRP DGSPFTSFAQ VLVAAARNRR LPAPPSPADD LYDPPHRSSL
301: VSKIAYTHQF LCLDKAAVRT STTSDDHHPW RLCTLQQVEE VKCLARLLPV WSSGIVYYIV LTNLGNYNVL QAMQTDRHVV AGGSFQIPAG SFVVFNMLAL
401: TLWLPFYDGV LVPAMQRVTK REGGITQLQR IGVGIVLSIV TMLVAAAVER HRRRVGDATS CFLLVPQQML AGLSEAFAII GQVEFYYKQF PENMRSVAGA
501: LLSLGFAIAS YASGLMVSVV HRTTGGGRDG RPDWLAQDLN QGRVDLYYLL IAAMAAVNLV YFVVCARWYR FKKPAAAAHA DADVELELEG KAAAPPV
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.