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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • peroxisome 1
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:cytosol
MultiLoc:peroxisome
Plant-mPloc:vacuole
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400065196 Potato plasma membrane 97.44 96.79
KRH03408 Soybean cytosol, peroxisome, plasma membrane 68.82 68.24
KRH56970 Soybean cytosol, peroxisome, plasma membrane 69.34 68.17
KRH56968 Soybean plasma membrane 64.57 63.59
KRH03412 Soybean plasma membrane 62.52 62.63
Solyc03g113430.2.1 Tomato plasma membrane 61.5 61.71
KRH03409 Soybean plasma membrane 63.71 61.11
KRH56969 Soybean plasma membrane 63.2 60.72
Solyc06g071570.2.1 Tomato plasma membrane 59.63 60.55
Bra035886.1-P Field mustard plasma membrane 50.43 59.56
CDY45756 Canola plasma membrane 57.24 58.84
GSMUA_Achr5P15010_001 Banana cytosol, peroxisome, plasma membrane 55.37 58.04
Solyc06g071090.1.1 Tomato endoplasmic reticulum, plasma membrane 29.3 56.77
CDY30731 Canola plasma membrane 57.92 56.76
GSMUA_Achr4P22320_001 Banana plasma membrane 48.89 56.72
Bra029248.1-P Field mustard plasma membrane 58.94 56.54
CDX84344 Canola plasma membrane 57.92 56.48
CDY45754 Canola plasma membrane 57.92 56.48
Bra019521.1-P Field mustard plasma membrane 58.77 56.46
CDY00315 Canola plasma membrane 58.77 56.37
AT5G62680.1 Thale cress golgi, peroxisome, vacuole 59.11 56.33
CDY36913 Canola cytosol, peroxisome, plasma membrane 58.94 56.26
CDY51783 Canola cytosol, peroxisome, plasma membrane 57.75 56.22
Bra010111.1-P Field mustard plasma membrane 58.6 56.21
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 58.77 56.1
Bra035885.1-P Field mustard peroxisome 53.83 56.03
CDX87266 Canola peroxisome 54.68 56.02
GSMUA_Achr5P15030_001 Banana cytosol 45.14 55.91
CDY16763 Canola peroxisome 54.51 55.75
CDY09846 Canola plasma membrane 40.55 55.48
Bra025695.1-P Field mustard plasma membrane 54.68 55.34
CDY26715 Canola plasma membrane 54.68 55.34
CDX83801 Canola cytosol, peroxisome, plasma membrane 55.54 55.16
AT1G18880.1 Thale cress cytosol, peroxisome, plasma membrane 54.86 54.86
AT3G47960.1 Thale cress plasma membrane 58.94 54.4
CDY69433 Canola golgi, peroxisome, plastid 58.6 54.26
CDY21692 Canola plasma membrane 52.81 54.01
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 56.56 53.98
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 54.34 53.89
CDX81902 Canola cytosol, peroxisome, plasma membrane 54.34 53.89
CDX68450 Canola cytosol, peroxisome, plasma membrane 56.39 53.82
CDX83027 Canola cytosol, peroxisome, plasma membrane 55.03 53.65
CDY21805 Canola cytosol, peroxisome, plasma membrane 56.73 53.62
CDX96690 Canola plasma membrane 54.68 52.88
Zm00001d031213_P001 Maize plasma membrane 45.32 52.26
Os03t0687000-02 Rice plasma membrane 51.96 51.96
Zm00001d033528_P003 Maize cytosol, peroxisome, plasma membrane 52.13 51.95
Zm00001d013529_P002 Maize plasma membrane 51.96 51.61
EER91066 Sorghum cytosol, peroxisome, plasma membrane 52.13 51.6
Os12t0638300-01 Rice extracellular, plasma membrane 50.09 50.09
HORVU4Hr1G004460.1 Barley cytosol, peroxisome, plasma membrane 50.94 49.75
TraesCS4B01G029600.1 Wheat cytosol, peroxisome, plasma membrane 50.09 49.41
TraesCS4D01G026800.1 Wheat golgi, unclear 50.09 49.33
TraesCS4A01G283900.1 Wheat golgi, unclear 50.09 49.25
TraesCS2B01G057700.1 Wheat plasma membrane 50.09 49.08
KXG24141 Sorghum cytosol, peroxisome, plasma membrane 49.57 48.99
TraesCS2A01G045500.1 Wheat plasma membrane 49.91 48.91
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 49.4 48.9
TraesCS2D01G044200.1 Wheat plasma membrane 49.74 48.75
TraesCS5A01G037900.1 Wheat cytosol, peroxisome, plasma membrane 50.94 48.54
TraesCS5D01G045300.1 Wheat cytosol, peroxisome, plasma membrane 50.77 48.53
TraesCS5B01G001100.1 Wheat cytosol, nucleus, plasma membrane 50.09 48.43
EES16414 Sorghum cytosol, peroxisome, plasma membrane 49.23 48.41
TraesCS5D01G012500.1 Wheat cytosol, peroxisome, plasma membrane 50.09 48.12
TraesCS5B01G039100.1 Wheat cytosol, nucleus, plasma membrane 50.6 48.06
TraesCS5A01G004400.1 Wheat cytosol, nucleus, plasma membrane 50.09 48.04
HORVU7Hr1G018540.1 Barley cytosol, nucleus, plasma membrane 50.09 47.88
HORVU5Hr1G000800.3 Barley cytosol, peroxisome, plasma membrane 49.23 47.85
TraesCS2D01G044000.1 Wheat plasma membrane 49.06 47.84
TraesCS2B01G057600.1 Wheat cytosol, peroxisome, plasma membrane 48.89 47.44
Os12t0638200-01 Rice cytosol, endoplasmic reticulum, peroxisome 47.02 46.94
EER98133 Sorghum plasma membrane 51.45 46.39
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 44.63 43.16
HORVU2Hr1G006820.2 Barley golgi, plasma membrane 49.74 42.57
Solyc05g009500.2.1 Tomato plasma membrane 38.33 39.27
Solyc12g007220.1.1 Tomato cytosol, peroxisome, plasma membrane 36.97 37.03
Solyc04g005070.2.1 Tomato plasma membrane 34.92 35.78
Solyc06g075490.1.1 Tomato plasma membrane 33.39 35.7
Solyc06g075500.2.1 Tomato plasma membrane 32.37 34.99
Solyc05g006000.2.1 Tomato plasma membrane 34.92 34.98
Solyc05g006010.2.1 Tomato plasma membrane 34.75 34.87
Solyc05g005980.2.1 Tomato plasma membrane 34.24 34.72
Solyc03g113440.2.1 Tomato plasma membrane 35.09 34.56
Solyc11g072570.1.1 Tomato plasma membrane 32.54 34.17
Solyc06g005070.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid 18.23 33.97
Solyc06g075480.2.1 Tomato plasma membrane 32.03 33.94
Solyc08g066940.2.1 Tomato plasma membrane 29.64 33.92
Solyc12g044310.1.1 Tomato plasma membrane 36.29 33.86
Solyc06g075450.1.1 Tomato extracellular, plasma membrane, vacuole 31.18 33.52
Solyc03g120560.2.1 Tomato plasma membrane 34.24 33.33
Solyc06g075440.1.1 Tomato plasma membrane 29.98 33.15
Solyc05g005950.2.1 Tomato plasma membrane 32.2 32.81
Solyc03g120550.2.1 Tomato plasma membrane 35.6 32.66
Solyc05g005920.2.1 Tomato plasma membrane 32.37 32.59
Solyc05g005990.2.1 Tomato plasma membrane 25.21 32.24
Solyc05g005960.2.1 Tomato plasma membrane 31.52 32.12
Solyc11g072560.1.1 Tomato plasma membrane 28.11 32.1
Solyc11g072580.1.1 Tomato plasma membrane 29.81 31.88
Bra016534.1-P Field mustard plastid 55.88 31.78
Solyc05g005940.2.1 Tomato plasma membrane 30.66 31.09
Solyc05g005970.2.1 Tomato plasma membrane 30.32 30.69
Solyc12g095810.1.1 Tomato plasma membrane 31.35 28.01
Solyc05g005910.2.1 Tomato plasma membrane 32.37 25.17
Protein Annotations
MapMan:24.2.2.9GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085InterPro:IPR020846UniProt:K4BKJ4
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF59
SUPFAM:SSF103473EnsemblPlantsGene:Solyc03g113420.2EnsemblPlants:Solyc03g113420.2.1TMHMM:TMhelixUniParc:UPI0002767C19SEG:seg
Description
No Description!
Coordinates
chr3:-:63564752..63568730
Molecular Weight (calculated)
65745.6 Da
IEP (calculated)
9.690
GRAVY (calculated)
0.293
Length
587 amino acids
Sequence
(BLAST)
001: MEKKITSFRD EDSEKEPAIN YRGVKAMPFI IGNETFEKLG AIGTLSNLLI YLTSVFNLKH ISAVTLINIF NGTTNFATLI GAFLSDTYFG RYKTLGFSSI
101: TSFLGLFVIT LTAVFKKLHP PHCESKDISQ CIGPTGWQMA FLLSGFGLLI IGAAGIRPCN LAFGADQFNP NTESGKRGIN SFFNWYFFTL TFAQMVSVTL
201: VVYVQSDISW SIGLAIPAMF MLISCFLFFG GTKIYVKVKP EGSPLTSIAQ VVVVSIKKRR LKLPEQPWKS LFNYTPLKSI NSKLPYTHQF RFLDKAAIVT
301: PEDQIKSDGS AVNPWNLCSL QQVQEAKCVI RVIPIWAAAI IYHVAIVEQQ QFVVYQALQS NRHVGTSNFQ IPAATYTIFS MLSLTLWIPI YDRIVVPLLR
401: RITGKEGGIT ILQRMGFGIF LTVLSSLVSA FIEKRRRNLV FTNPALGLHS ERGLVSSMSA LWLVPQLSLA GLAEAFCAIG QVEFYYKQFP ENMRSIAGSF
501: LFLGMAASSY LNSLLIYIVH NTTGKAKTGN WLPEDLNKGK LDYFYFLITA LGIMNVVYFI ICARWYKYKG SDDTSSVELE MERKHFV
Best Arabidopsis Sequence Match ( AT5G62680.1 )
(BLAST)
001: MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG
101: TFVAAFLCDT YFGRYKTLSV AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR PCNLAFGADQ FNPKSESGKR
201: GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP
301: KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV
401: VFLMTGMTVF IVVYDRVLVP TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS MSAMWLIPQL SLAGVAEAFA
501: AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT
601: YETNENIIKQ QDKNVA
Arabidopsis Description
NPF2.11GTR2 [Source:UniProtKB/TrEMBL;Acc:A0A178UEQ7]
SUBAcon: [peroxisome,golgi,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.