Factsheet for Solyc03g120550.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
cytosol 1
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane, vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400006545	Potato	plasma membrane	64.84	88.87
Solyc03g120560.2.1	Tomato	plasma membrane	81.41	86.4
Solyc12g044310.1.1	Tomato	plasma membrane	61.56	62.64
VIT_09s0002g04130.t01	Wine grape	plasma membrane	56.09	57.72
Bra033884.1-P	Field mustard	plasma membrane	22.03	56.63
CDY70561	Canola	plasma membrane	47.5	55.88
CDY28371	Canola	plasma membrane	41.41	54.53
CDX97728	Canola	plasma membrane	50.47	54.47
CDY30141	Canola	plasma membrane	50.47	54.47
CDY51257	Canola	plastid	41.09	54.12
AT3G16180.1	Thale cress	plasma membrane	49.69	53.81
Bra027185.1-P	Field mustard	plasma membrane	49.84	53.79
AT1G52190.1	Thale cress	cytosol, peroxisome, plasma membrane	50.94	53.71
Bra018952.1-P	Field mustard	plasma membrane	50.62	53.47
KRH44330	Soybean	plasma membrane	48.59	52.98
CDY69519	Canola	plasma membrane	24.06	52.74
CDY69522	Canola	plasma membrane	23.91	52.4
KRH09892	Soybean	cytosol, peroxisome, plasma membrane	48.44	51.58
CDY20187	Canola	plasma membrane	23.59	51.36
KRH47260	Soybean	plasma membrane	47.97	50.66
KRH47259	Soybean	plasma membrane	48.28	50.57
KRH44331	Soybean	cytosol, peroxisome, plasma membrane	47.66	50.25
KRH09893	Soybean	cytosol, peroxisome, plasma membrane	48.28	50.16
Solyc12g007220.1.1	Tomato	cytosol, peroxisome, plasma membrane	43.59	47.61
Solyc05g005980.2.1	Tomato	plasma membrane	42.03	46.46
Solyc05g005940.2.1	Tomato	plasma membrane	40.16	44.39
Solyc05g005970.2.1	Tomato	plasma membrane	40.0	44.14
Solyc05g005950.2.1	Tomato	plasma membrane	39.69	44.1
Solyc05g005920.2.1	Tomato	plasma membrane	39.69	43.57
Solyc05g005960.2.1	Tomato	plasma membrane	38.91	43.23
Solyc04g005070.2.1	Tomato	plasma membrane	38.28	42.76
Solyc08g066940.2.1	Tomato	plasma membrane	34.22	42.69
Solyc12g095810.1.1	Tomato	plasma membrane	40.94	39.88
Solyc05g006000.2.1	Tomato	plasma membrane	35.94	39.25
Solyc05g006010.2.1	Tomato	plasma membrane	35.78	39.15
Solyc05g005990.2.1	Tomato	plasma membrane	27.19	37.91
Bra021168.1-P	Field mustard	plasma membrane	50.62	37.2
Solyc05g009500.2.1	Tomato	plasma membrane	32.5	36.3
Solyc03g113420.2.1	Tomato	plasma membrane	32.66	35.6
Solyc05g005910.2.1	Tomato	plasma membrane	41.25	34.97
Solyc11g072570.1.1	Tomato	plasma membrane	30.31	34.7
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	32.5	34.27
Solyc03g113430.2.1	Tomato	plasma membrane	31.09	34.02
Solyc06g071570.2.1	Tomato	plasma membrane	30.62	33.91
Solyc06g075500.2.1	Tomato	plasma membrane	28.59	33.7
Solyc11g072560.1.1	Tomato	plasma membrane	27.03	33.66
Solyc06g075490.1.1	Tomato	plasma membrane	28.59	33.33
Solyc06g075440.1.1	Tomato	plasma membrane	26.72	32.2
Solyc06g075480.2.1	Tomato	plasma membrane	27.81	32.13
Solyc06g075450.1.1	Tomato	extracellular, plasma membrane, vacuole	27.34	32.05
Solyc03g113440.2.1	Tomato	plasma membrane	29.69	31.88
Solyc11g072580.1.1	Tomato	plasma membrane	27.34	31.88
Solyc06g071090.1.1	Tomato	endoplasmic reticulum, plasma membrane	14.53	30.69
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	13.59	27.62

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006857	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
InterPro:IPR020846	UniProt:K4BMK4	InterPro:MFS_dom	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF157	InterPro:PTR2_symporter_CS	SUPFAM:SSF103473	EnsemblPlantsGene:Solyc03g120550.2
EnsemblPlants:Solyc03g120550.2.1	TMHMM:TMhelix	UniParc:UPI0002766D68	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:68921264..68926102

Molecular Weight (calculated)

71007.0 Da

IEP (calculated)

9.498

GRAVY (calculated)

0.159

Length

640 amino acids

Sequence
(BLAST)

001: MEQEMAEYLP LDRGSKMEDS EKQTSSHSSP IPIKSRKKGG IITMPFIIAN EALENVASYG LLPNMTNYLM GEYRMGFTTT QNLLFFWSAA TNFLPIVGAV
101: VADSYLGRFL TIGLGSIFSF MGSAVLWLTA MIPKARPPAC NQAGQACKST RGPQYMLLVF AFLLMSVGAG GIRPCSLAFG ANQFDKGGSN PNKQTVLESF
201: FAWYYTSSVV SVLIALTGIV YLQDKLGWKI GFGVPAMLMF LSALFFFLAS PFYIKQKVRS NVFASFIRVI VVAFKNRKLH YPNQNSDYHS KNGSGPQVPT
301: DKLRFLNKAC IIRSPEDVKP NGVAANPWNL CTVEQVEELK SLIRVVPLWS TGIMISINLS QSSFPLLQAQ SMNRHLRIMI SINLSQSSFP LLQAQSMNRH
401: LSKGFQIPAG SFGMFLMIAL TIWVFLYDRV MLPLASKIRG RPVRLKPIVR MGLGIFVSCM SMLVSGIIEH IRRRRAINQG LLNNSQGLVE MSALWLIIPN
501: SLNGIAEALN AIGATEFYYS ELPKSMSSIA SALLGLGMAV ANLLASVILS AVDKYTKGKG KESWISSNIN KGHYEYYYWL LALLTAFNLL YFMACCWQYG
601: PSVDVDITMR MMEPSDDEND DDAEDDLPQK KKSTPDLNSC

Best Arabidopsis Sequence Match ( AT1G52190.1 )
(BLAST)

001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN

Arabidopsis Description

NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.