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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY69519 Canola plasma membrane 98.97 98.97
CDY20187 Canola plasma membrane 76.71 76.19
Bra018952.1-P Field mustard plasma membrane 98.63 47.52
AT1G52190.1 Thale cress cytosol, peroxisome, plasma membrane 90.07 43.33
CDY70561 Canola plasma membrane 78.77 42.28
CDY65728 Canola cytosol 27.4 40.2
CDX97728 Canola plasma membrane 79.11 38.95
CDY30141 Canola plasma membrane 78.77 38.79
CDY69402 Canola plasma membrane 39.38 38.59
CDX86030 Canola plasma membrane 30.14 32.35
CDY28371 Canola plasma membrane 51.03 30.66
CDY51257 Canola plastid 49.66 29.84
VIT_09s0002g04130.t01 Wine grape plasma membrane 63.01 29.58
PGSC0003DMT400068025 Potato plasma membrane 53.42 26.04
Solyc12g044310.1.1 Tomato plasma membrane 54.11 25.12
Solyc03g120560.2.1 Tomato plasma membrane 50.0 24.21
Solyc03g120550.2.1 Tomato plasma membrane 52.4 23.91
CDY09846 Canola plasma membrane 33.22 22.61
CDY67993 Canola plasma membrane 40.75 21.4
CDY38595 Canola cytosol, peroxisome, plasma membrane 40.41 19.93
PGSC0003DMT400006545 Potato plasma membrane 31.85 19.91
CDY07377 Canola cytosol, peroxisome, plasma membrane 40.41 19.8
CDY04237 Canola cytosol, peroxisome, plasma membrane 39.73 19.5
CDY56086 Canola cytosol, peroxisome, plasma membrane 39.38 19.46
CDY53067 Canola cytosol, peroxisome, plasma membrane 39.04 19.19
CDY05592 Canola plasma membrane 36.99 18.88
CDY52504 Canola plasma membrane 36.99 18.88
CDY54537 Canola cytosol, peroxisome, plasma membrane 39.73 18.77
CDY11647 Canola plastid 39.38 18.58
CDY38767 Canola plastid 39.38 18.49
CDY23545 Canola cytosol, peroxisome, plasma membrane 37.67 18.12
CDY48389 Canola cytosol, peroxisome, plasma membrane 37.33 17.96
CDX86198 Canola peroxisome 34.93 17.93
CDY40280 Canola plasma membrane 34.59 17.78
CDY28441 Canola cytosol, peroxisome, plasma membrane 34.25 17.61
CDY25813 Canola cytosol, peroxisome, plasma membrane 33.9 17.43
CDY11648 Canola plasma membrane 32.88 17.42
CDY38766 Canola plasma membrane 32.88 17.42
CDY12696 Canola plasma membrane 30.82 17.41
CDX81495 Canola plasma membrane 30.82 17.34
CDY26715 Canola plasma membrane 33.9 17.07
CDY21692 Canola plasma membrane 32.88 16.72
CDX83801 Canola cytosol, peroxisome, plasma membrane 33.56 16.58
CDX81902 Canola cytosol, peroxisome, plasma membrane 33.22 16.39
CDY51783 Canola cytosol, peroxisome, plasma membrane 33.56 16.25
CDY30731 Canola plasma membrane 33.22 16.19
CDX96690 Canola plasma membrane 33.56 16.14
CDY45754 Canola plasma membrane 33.22 16.11
CDX84344 Canola plasma membrane 33.22 16.11
CDX87266 Canola peroxisome 31.51 16.06
CDY16763 Canola peroxisome 31.51 16.03
CDY45756 Canola plasma membrane 31.16 15.94
CDY36913 Canola cytosol, peroxisome, plasma membrane 33.56 15.94
CDY00315 Canola plasma membrane 33.22 15.85
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 18.84 15.8
CDY21805 Canola cytosol, peroxisome, plasma membrane 33.22 15.62
CDX83027 Canola cytosol, peroxisome, plasma membrane 32.19 15.61
CDX68450 Canola cytosol, peroxisome, plasma membrane 32.88 15.61
CDY18499 Canola plasma membrane 29.45 15.44
CDX99152 Canola plasma membrane 29.45 15.44
CDY69433 Canola golgi, peroxisome, plastid 33.22 15.3
CDX99151 Canola plasma membrane 28.77 15.14
CDY48147 Canola plasma membrane 26.71 14.16
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 28.42 14.0
CDY52480 Canola plasma membrane 21.92 13.88
CDX96007 Canola cytosol, peroxisome, plasma membrane 31.51 13.29
CDX69747 Canola plasma membrane 41.44 7.83
CDY68532 Canola cytosol 0.0 0.0
CDX86031 Canola plasma membrane 0.0 0.0
Protein Annotations
Gene3D:1.20.1250.20MapMan:24.2.2.9GO:A0A078JVG7UniProt:A0A078JVG7EnsemblPlants:CDY69522ProteinID:CDY69522
ProteinID:CDY69522.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00088487001InterPro:IPR020846
InterPro:MFS_domInterPro:MFS_trans_sfPFAM:PF00854InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF157
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE7B29:::
Description
BnaCnng63980DBnaCnng63980D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JVG7]
Coordinates
chrLK039611:-:180..3298
Molecular Weight (calculated)
31986.1 Da
IEP (calculated)
9.390
GRAVY (calculated)
0.309
Length
292 amino acids
Sequence
(BLAST)
001: MENPTNETEA KQIQLNGEKK PKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAATNFTPL LGAFLSDSYL GRFLTIAIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG NHCGSATASQ LALLYTAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWRIGFGVP AVLMLIAAFL FVLAFPLYVR RNVSKSLFTG LAQVVVAAYV NRKLSLPNQQ DSSITYYHMK DSELKAPSHK LR
Best Arabidopsis Sequence Match ( AT1G52190.1 )
(BLAST)
001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN
Arabidopsis Description
NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.