Factsheet for Bra018952.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
plasma membrane 4
vacuole 2
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	plasma membrane
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY69519	Canola	plasma membrane	48.02	99.66
CDY69522	Canola	plasma membrane	47.52	98.63
AT1G52190.1	Thale cress	cytosol, peroxisome, plasma membrane	92.57	92.42
Bra027185.1-P	Field mustard	plasma membrane	76.07	77.74
Bra033884.1-P	Field mustard	plasma membrane	30.86	75.1
VIT_09s0002g04130.t01	Wine grape	plasma membrane	62.87	61.25
PGSC0003DMT400006545	Potato	plasma membrane	43.23	56.1
KRH44330	Soybean	plasma membrane	54.13	55.88
KRH09892	Soybean	cytosol, peroxisome, plasma membrane	53.8	54.24
PGSC0003DMT400068025	Potato	plasma membrane	53.14	53.76
KRH47259	Soybean	plasma membrane	54.13	53.68
KRH09893	Soybean	cytosol, peroxisome, plasma membrane	53.8	52.92
KRH47260	Soybean	plasma membrane	52.81	52.81
KRH44331	Soybean	cytosol, peroxisome, plasma membrane	52.64	52.55
Solyc03g120560.2.1	Tomato	plasma membrane	51.82	52.07
Bra021168.1-P	Field mustard	plasma membrane	74.59	51.89
Solyc12g044310.1.1	Tomato	plasma membrane	53.47	51.51
Solyc03g120550.2.1	Tomato	plasma membrane	53.47	50.62
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.63	37.25
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.14	36.99
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.98	35.87
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.98	35.1
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.84	35.04
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.64	34.59
Bra020609.1-P	Field mustard	plasma membrane	32.51	34.44
Bra016259.1-P	Field mustard	plastid	34.98	34.08
Bra009996.1-P	Field mustard	peroxisome	31.85	33.92
Bra038366.1-P	Field mustard	plasma membrane	25.91	33.84
Bra035886.1-P	Field mustard	plasma membrane	27.72	33.8
Bra025695.1-P	Field mustard	plasma membrane	32.34	33.79
Bra016260.1-P	Field mustard	plasma membrane	29.87	32.85
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.01	32.77
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.0	32.52
Bra019521.1-P	Field mustard	plasma membrane	32.34	32.08
Bra021295.1-P	Field mustard	plasma membrane	29.21	31.78
Bra033955.1-P	Field mustard	plasma membrane	28.71	31.69
Bra010111.1-P	Field mustard	plasma membrane	31.85	31.54
Bra029248.1-P	Field mustard	plasma membrane	31.85	31.54
Bra035885.1-P	Field mustard	peroxisome	29.21	31.38
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	31.35	30.89
Bra033836.1-P	Field mustard	plasma membrane	25.25	29.31
Bra016534.1-P	Field mustard	plastid	32.67	19.19
Bra008953.1-P	Field mustard	plasma membrane	41.58	16.3
Bra038280.1-P	Field mustard	plasma membrane	27.72	15.04

Protein Annotations

MapMan:24.2.2.9	EnsemblPlantsGene:Bra018952	EnsemblPlants:Bra018952.1	EnsemblPlants:Bra018952.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0015706	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	GO:GO:0080054	InterPro:IPR020846	UniProt:M4DR09	InterPro:MFS_dom
InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF157	SUPFAM:SSF103473
TMHMM:TMhelix	UniParc:UPI000253E90B	:	:	:	:

Description

AT1G52190 (E=0.0) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA06:-:1028152..1032270

Molecular Weight (calculated)

67056.0 Da

IEP (calculated)

9.194

GRAVY (calculated)

0.261

Length

606 amino acids

Sequence
(BLAST)

001: MENPTTETEA KQIQLNGEKK PKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAATNFTPL LGAFLSDSYL GRFLTIAIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG NHCGSATASQ LALLYSAFVL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWRIGFGVP AVLMLIAALL FVLAFPLYVR RNVSKSLFTG LAQVVVAAYV NRKLSLPNQQ DSSITYYHMK DSELKAPSHK LRFLNKACLI
301: SNREEEIGSD GFALKPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS FQVPAGSFGM FTIIALAMWV VLYDRAVIPL
401: ASKIRGRPFR LSVKLRMGLG LFMSFLAMAI SAMVETLRRK KALSQGYANN ANAIVDISAM WLVPQYVLHG LAEALTAIGQ TEFFYTEFPK SMSSIAASLF
501: GLGMAVASLL ASVILNAVNE LTSRNGEDSW VSDNINKGHY NYYYWLLAIM SFINVIYYMI CSWSYGPLVD QVRNGRVNGV REEEELLDIV GKGFEKEDLR
601: DVVKTN

Best Arabidopsis Sequence Match ( AT1G52190.1 )
(BLAST)

001: MENPPNETEA KQIQTNEGKK TKGGIITMPF IIANEAFEKV ASYGLLPNMI MYLIRDYRFG VAKGTNVLFM WSAASNFTPL LGAFLSDSYL GRFLTISIAS
101: LSSFLGMVLL WLTAMLPQVK PSPCDPTAAG SHCGSSTASQ LALLYSAFAL ISIGSGGIRP CSLAFGADQL DNKENPKNER VLESFFGWYY ASSAVAVLIA
201: FTGIVYIQEH LGWKIGFGVP AVLMLIAALL FILASPLYVT RGVTKSLFTG LAQAIVAAYK KRKLSLPDHH DSFDCYYHMK DSEIKAPSQK LRFLNKACLI
301: SNREEEIGSD GFALNPWRLC TTDKVEELKA LIKVIPIWST GIMMSINTSQ SSFQLLQATS MDRRLSRHGS SFQVPAGSFG MFTIIALALW VILYDRAVIP
401: LASKIRGRPF RLSVKLRMGL GLFMSFLAMA ISAMVESFRR KKAISQGYAN NSNAVVDISA MWLVPQYVLH GLAEALTAIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVASL LASVVLNAVN ELTSRNGKES WVSDNINKGH YNYYYWVLAI MSFINVIYYV ICSWSYGPLV DQVRNGRVNG VREEEELIDI VGKGFEKEDL
601: SPVVKTN

Arabidopsis Description

NPF1.2Protein NRT1/ PTR FAMILY 1.2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M817]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.