Factsheet for Bra033884.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 3
vacuole 2
endoplasmic reticulum 1
mitochondrion 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY28371	Canola	plasma membrane	98.39	50.41
CDY51257	Canola	plastid	97.59	50.0
Bra027185.1-P	Field mustard	plasma membrane	92.77	38.95
AT3G16180.1	Thale cress	plasma membrane	89.16	37.56
Bra018952.1-P	Field mustard	plasma membrane	75.1	30.86
PGSC0003DMT400006545	Potato	plasma membrane	54.62	29.12
Bra021168.1-P	Field mustard	plasma membrane	100.0	28.59
VIT_09s0002g04130.t01	Wine grape	plasma membrane	62.25	24.92
KRH47260	Soybean	plasma membrane	55.02	22.61
KRH09892	Soybean	cytosol, peroxisome, plasma membrane	54.22	22.46
KRH44330	Soybean	plasma membrane	52.61	22.32
PGSC0003DMT400068025	Potato	plasma membrane	53.41	22.2
Solyc03g120560.2.1	Tomato	plasma membrane	53.41	22.06
Solyc03g120550.2.1	Tomato	plasma membrane	56.63	22.03
KRH44331	Soybean	cytosol, peroxisome, plasma membrane	53.41	21.91
KRH09893	Soybean	cytosol, peroxisome, plasma membrane	53.82	21.75
Solyc12g044310.1.1	Tomato	plasma membrane	54.22	21.46
KRH47259	Soybean	plasma membrane	52.21	21.28
Bra038366.1-P	Field mustard	plasma membrane	33.73	18.1
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.14	15.2
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.73	14.09
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	33.73	13.91
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.53	13.71
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.52	13.38
Bra016259.1-P	Field mustard	plastid	32.93	13.18
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	30.52	12.84
Bra033836.1-P	Field mustard	plasma membrane	26.51	12.64
Bra025695.1-P	Field mustard	plasma membrane	29.32	12.59
Bra033955.1-P	Field mustard	plasma membrane	26.91	12.2
Bra016260.1-P	Field mustard	plasma membrane	26.91	12.16
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.72	12.03
Bra019521.1-P	Field mustard	plasma membrane	29.32	11.95
Bra029248.1-P	Field mustard	plasma membrane	29.32	11.93
Bra010111.1-P	Field mustard	plasma membrane	29.32	11.93
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	29.32	11.87
Bra021295.1-P	Field mustard	plasma membrane	26.51	11.85
Bra035886.1-P	Field mustard	plasma membrane	22.89	11.47
Bra009996.1-P	Field mustard	peroxisome	25.7	11.25
Bra020609.1-P	Field mustard	plasma membrane	25.7	11.19
Bra035885.1-P	Field mustard	peroxisome	23.29	10.28
Bra016534.1-P	Field mustard	plastid	29.32	7.07
Bra008953.1-P	Field mustard	plasma membrane	39.76	6.4
Bra038280.1-P	Field mustard	plasma membrane	26.1	5.82
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	0.4	0.29

Protein Annotations

EnsemblPlants:Bra033884.1	EnsemblPlants:Bra033884.1-P	EnsemblPlantsGene:Bra033884	Gene3D:1.20.1250.20	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF157	PFAM:PF00854
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000254733B	UniProt:M4EYJ2	MapMan:24.2.2.9	:

Description

AT3G16180 (E=9e-125) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA05:-:14797112..14797861

Molecular Weight (calculated)

27633.7 Da

IEP (calculated)

9.578

GRAVY (calculated)

0.197

Length

249 amino acids

Sequence
(BLAST)

001: MMSINVSQNS FQLLQANSMD RRLSDHSTFK IPPGSFGMFT IIALIAWVVL YDRAILPLAS KIRGKPVRIN VKIRMGLGLF ISFLAMAVSA TVEHYRRRTA
101: ISQGLANNAT ATVNISAMWL VPQYGLHGLA EALTGIGQTE FFYTEFPKSM SSIAAALFGL GMAVANILAS VILNVVKNSS KKGGESWIED NINKGHYDYY
201: YWVLAILSFV NVIYYIVCSW SYGPTMDQLR NDKVNGVRGE EQEEAVKLN

Best Arabidopsis Sequence Match ( AT3G16180.1 )
(BLAST)

001: MENPPDQTES KETLQQPITR RRTKGGLLTM PFIIANEGFE KVASYGLLQN MILYLMSDYR LGLVKGQTVL FMWVAATNFM PLVGAFLSDS YLGRFLTIVI
101: ASLSSLLGMV VLWLTAMLPQ VKPSPCVATA GTNCSSATSS QLALLYTAFA LISIGSGGIR PCSLAFGADQ LDNKENPKNE RVLESFFGWY YASSSVAVLI
201: AFTVIVYIQD HLGWKIGFGI PAILMLLAGF LFVFASPLYV KRDVSKSLFT GLAQVVAAAY VKRNLTLPDH HDSRDCYYRL KDSELKAPSD KLRFLNKACA
301: ISNRDEDLGS DGLALNQWRL CTTDQVEKLK ALVKVIPVWS TGIMMSINVS QNSFQLLQAK SMDRRLSSNS TFQIPAGSFG MFTIIALISW VVLYDRAILP
401: LASKIRGRPV RVNVKIRMGL GLFISFLAMA VSATVEHYRR KTAISQGLAN DANSTVSISA MWLVPQYVLH GLAEALTGIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVANI LASVILNAVK NSSKQGNVSW IEDNINKGHY DYYYWVLAIL SFVNVIYYVV CSWSYGPTVD QVRNDKVNGM RKEEEEVIKL N

Arabidopsis Description

NPF1.1Protein NRT1/ PTR FAMILY 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.