Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033884.1-P | Field mustard | plasma membrane | 50.0 | 97.59 |
| CDY28371 | Canola | plasma membrane | 96.3 | 96.3 |
| CDY70561 | Canola | plasma membrane | 86.63 | 77.39 |
| CDY30141 | Canola | plasma membrane | 88.89 | 72.85 |
| CDX97728 | Canola | plasma membrane | 88.68 | 72.68 |
| AT3G16180.1 | Thale cress | plasma membrane | 84.98 | 69.88 |
| CDY20187 | Canola | plasma membrane | 34.77 | 57.48 |
| PGSC0003DMT400006545 | Potato | plasma membrane | 53.29 | 55.46 |
| CDY69522 | Canola | plasma membrane | 29.84 | 49.66 |
| CDY69519 | Canola | plasma membrane | 29.84 | 49.66 |
| VIT_09s0002g04130.t01 | Wine grape | plasma membrane | 61.52 | 48.07 |
| PGSC0003DMT400068025 | Potato | plasma membrane | 51.85 | 42.07 |
| Solyc03g120560.2.1 | Tomato | plasma membrane | 52.06 | 41.96 |
| Solyc12g044310.1.1 | Tomato | plasma membrane | 53.5 | 41.34 |
| Solyc03g120550.2.1 | Tomato | plasma membrane | 54.12 | 41.09 |
| CDY67993 | Canola | plasma membrane | 40.53 | 35.43 |
| CDX91207 | Canola | cytosol, endoplasmic reticulum, plasma membrane | 25.1 | 35.06 |
| CDY52480 | Canola | plasma membrane | 30.86 | 32.54 |
| CDY56086 | Canola | cytosol, peroxisome, plasma membrane | 36.42 | 29.95 |
| CDY38595 | Canola | cytosol, peroxisome, plasma membrane | 36.42 | 29.9 |
| CDY53067 | Canola | cytosol, peroxisome, plasma membrane | 36.01 | 29.46 |
| CDY40280 | Canola | plasma membrane | 34.36 | 29.4 |
| CDY28441 | Canola | cytosol, peroxisome, plasma membrane | 34.16 | 29.23 |
| CDY25813 | Canola | cytosol, peroxisome, plasma membrane | 33.95 | 29.05 |
| CDY07377 | Canola | cytosol, peroxisome, plasma membrane | 35.6 | 29.03 |
| CDY23545 | Canola | cytosol, peroxisome, plasma membrane | 36.01 | 28.83 |
| CDY38767 | Canola | plastid | 36.63 | 28.62 |
| CDY11647 | Canola | plastid | 36.42 | 28.59 |
| CDY04237 | Canola | cytosol, peroxisome, plasma membrane | 34.98 | 28.57 |
| CDY48389 | Canola | cytosol, peroxisome, plasma membrane | 35.39 | 28.34 |
| CDY45756 | Canola | plasma membrane | 32.72 | 27.85 |
| CDX86031 | Canola | plasma membrane | 8.85 | 27.74 |
| CDY26715 | Canola | plasma membrane | 32.3 | 27.07 |
| CDY54537 | Canola | cytosol, peroxisome, plasma membrane | 34.36 | 27.02 |
| CDX83801 | Canola | cytosol, peroxisome, plasma membrane | 32.72 | 26.9 |
| CDX81902 | Canola | cytosol, peroxisome, plasma membrane | 32.1 | 26.35 |
| CDY00315 | Canola | plasma membrane | 33.13 | 26.31 |
| CDY52504 | Canola | plasma membrane | 30.86 | 26.22 |
| CDY30731 | Canola | plasma membrane | 32.3 | 26.21 |
| CDY51783 | Canola | cytosol, peroxisome, plasma membrane | 32.51 | 26.2 |
| CDY36913 | Canola | cytosol, peroxisome, plasma membrane | 33.13 | 26.18 |
| CDX84344 | Canola | plasma membrane | 32.3 | 26.08 |
| CDY05592 | Canola | plasma membrane | 30.66 | 26.05 |
| CDX99152 | Canola | plasma membrane | 29.84 | 26.03 |
| CDX68450 | Canola | cytosol, peroxisome, plasma membrane | 32.92 | 26.02 |
| CDX86198 | Canola | peroxisome | 30.45 | 26.01 |
| CDY18499 | Canola | plasma membrane | 29.63 | 25.85 |
| CDY38766 | Canola | plasma membrane | 29.22 | 25.77 |
| CDY11648 | Canola | plasma membrane | 29.22 | 25.77 |
| CDY45754 | Canola | plasma membrane | 31.89 | 25.75 |
| CDY21692 | Canola | plasma membrane | 30.25 | 25.61 |
| CDX83027 | Canola | cytosol, peroxisome, plasma membrane | 31.69 | 25.58 |
| CDY12696 | Canola | plasma membrane | 27.16 | 25.53 |
| CDX96690 | Canola | plasma membrane | 31.69 | 25.37 |
| CDX81495 | Canola | plasma membrane | 26.95 | 25.24 |
| CDY69433 | Canola | golgi, peroxisome, plastid | 32.92 | 25.24 |
| CDY09846 | Canola | plasma membrane | 22.22 | 25.17 |
| CDY21805 | Canola | cytosol, peroxisome, plasma membrane | 31.89 | 24.96 |
| CDX99151 | Canola | plasma membrane | 28.4 | 24.86 |
| CDX87266 | Canola | peroxisome | 29.22 | 24.78 |
| CDY16763 | Canola | peroxisome | 29.22 | 24.74 |
| CDY48147 | Canola | plasma membrane | 27.37 | 24.14 |
| CDY69402 | Canola | plasma membrane | 14.61 | 23.83 |
| CDY16764 | Canola | cytosol, mitochondrion, plasma membrane, plastid | 27.37 | 22.43 |
| CDX86030 | Canola | plasma membrane | 12.14 | 21.69 |
| CDX96007 | Canola | cytosol, peroxisome, plasma membrane | 29.42 | 20.66 |
| CDY65728 | Canola | cytosol | 7.82 | 19.1 |
| CDX69747 | Canola | plasma membrane | 40.95 | 12.87 |
| CDY68532 | Canola | cytosol | 0.62 | 0.56 |
Protein Annotations
| Gene3D:1.20.1250.20 | MapMan:24.2.2.9 | GO:A0A078IMV7 | UniProt:A0A078IMV7 | EnsemblPlants:CDY51257 | ProteinID:CDY51257 |
| ProteinID:CDY51257.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0022857 | GO:GO:0055085 | EnsemblPlantsGene:GSBRNA2T00003024001 | InterPro:IPR020846 |
| InterPro:MFS_dom | InterPro:MFS_trans_sf | PFAM:PF00854 | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF157 |
| SUPFAM:SSF103473 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EE80C8 | SEG:seg | : |
Description
BnaC03g77810DBnaC03g77810D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IMV7]
Coordinates
chrLK032978:-:90007..91590
Molecular Weight (calculated)
53740.5 Da
IEP (calculated)
9.010
GRAVY (calculated)
0.249
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MMVLWLTAML PQVKPSPCVV STVTKCSSTA ATSSQLALLY FAFALRSIGS RGIRPCSLAF GADQLDNKEN PKYESVLESF FGWYYASSSV AVLIAFTVIV
101: YIQDHLRWRI GFGVPAILML PAGILFVLAS PLYVKRNATE SLFTGLAQVA VSAYVNRKLM LPGQNDSYGC YYHLNDSELK APSDKLRFLN KACVSSNQEE
201: DIGADGLALN PWRLCTKDQV EELKALVKVI PVWSTGIMMS INVSQNSFQL LQANSMDRRL SDHSTFKIPP GSFGMFTIIA LIAWVVLYDR AILPLASKIR
301: GKPVRINVKI RMGLGLFISF LAMAVSATVE HYRRRTAISQ GLANNANGIV NISAMWLVPQ YVLHGLAEAL TGIGQTEFFY TEFPKSMSSI VAALFGLGMA
401: VANILASVIL NVVKNSSKKG GESWIEDNIN KGHYDYYYWV LAILSFVNVI YYIVCSWSYG PAMDQLRNDK VNGVRGEEQE EAVKLN
101: YIQDHLRWRI GFGVPAILML PAGILFVLAS PLYVKRNATE SLFTGLAQVA VSAYVNRKLM LPGQNDSYGC YYHLNDSELK APSDKLRFLN KACVSSNQEE
201: DIGADGLALN PWRLCTKDQV EELKALVKVI PVWSTGIMMS INVSQNSFQL LQANSMDRRL SDHSTFKIPP GSFGMFTIIA LIAWVVLYDR AILPLASKIR
301: GKPVRINVKI RMGLGLFISF LAMAVSATVE HYRRRTAISQ GLANNANGIV NISAMWLVPQ YVLHGLAEAL TGIGQTEFFY TEFPKSMSSI VAALFGLGMA
401: VANILASVIL NVVKNSSKKG GESWIEDNIN KGHYDYYYWV LAILSFVNVI YYIVCSWSYG PAMDQLRNDK VNGVRGEEQE EAVKLN
001: MENPPDQTES KETLQQPITR RRTKGGLLTM PFIIANEGFE KVASYGLLQN MILYLMSDYR LGLVKGQTVL FMWVAATNFM PLVGAFLSDS YLGRFLTIVI
101: ASLSSLLGMV VLWLTAMLPQ VKPSPCVATA GTNCSSATSS QLALLYTAFA LISIGSGGIR PCSLAFGADQ LDNKENPKNE RVLESFFGWY YASSSVAVLI
201: AFTVIVYIQD HLGWKIGFGI PAILMLLAGF LFVFASPLYV KRDVSKSLFT GLAQVVAAAY VKRNLTLPDH HDSRDCYYRL KDSELKAPSD KLRFLNKACA
301: ISNRDEDLGS DGLALNQWRL CTTDQVEKLK ALVKVIPVWS TGIMMSINVS QNSFQLLQAK SMDRRLSSNS TFQIPAGSFG MFTIIALISW VVLYDRAILP
401: LASKIRGRPV RVNVKIRMGL GLFISFLAMA VSATVEHYRR KTAISQGLAN DANSTVSISA MWLVPQYVLH GLAEALTGIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVANI LASVILNAVK NSSKQGNVSW IEDNINKGHY DYYYWVLAIL SFVNVIYYVV CSWSYGPTVD QVRNDKVNGM RKEEEEVIKL N
101: ASLSSLLGMV VLWLTAMLPQ VKPSPCVATA GTNCSSATSS QLALLYTAFA LISIGSGGIR PCSLAFGADQ LDNKENPKNE RVLESFFGWY YASSSVAVLI
201: AFTVIVYIQD HLGWKIGFGI PAILMLLAGF LFVFASPLYV KRDVSKSLFT GLAQVVAAAY VKRNLTLPDH HDSRDCYYRL KDSELKAPSD KLRFLNKACA
301: ISNRDEDLGS DGLALNQWRL CTTDQVEKLK ALVKVIPVWS TGIMMSINVS QNSFQLLQAK SMDRRLSSNS TFQIPAGSFG MFTIIALISW VVLYDRAILP
401: LASKIRGRPV RVNVKIRMGL GLFISFLAMA VSATVEHYRR KTAISQGLAN DANSTVSISA MWLVPQYVLH GLAEALTGIG QTEFFYTEFP KSMSSIAASL
501: FGLGMAVANI LASVILNAVK NSSKQGNVSW IEDNINKGHY DYYYWVLAIL SFVNVIYYVV CSWSYGPTVD QVRNDKVNGM RKEEEEVIKL N
Arabidopsis Description
NPF1.1Protein NRT1/ PTR FAMILY 1.1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.