CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69747	Canola	plasma membrane	98.69	34.22
KRH09893	Soybean	cytosol, peroxisome, plasma membrane	2.05	1.79
CDX91207	Canola	cytosol, endoplasmic reticulum, plasma membrane	0.93	1.44
KRH47259	Soybean	plasma membrane	1.49	1.31
CDY67993	Canola	plasma membrane	1.12	1.08
CDY30141	Canola	plasma membrane	0.93	0.84
KRH47260	Soybean	plasma membrane	0.93	0.83
KRH44330	Soybean	plasma membrane	0.75	0.68
CDX97728	Canola	plasma membrane	0.75	0.67
CDY07377	Canola	cytosol, peroxisome, plasma membrane	0.75	0.67
KRH44331	Soybean	cytosol, peroxisome, plasma membrane	0.75	0.66
CDY23545	Canola	cytosol, peroxisome, plasma membrane	0.75	0.66
CDY54537	Canola	cytosol, peroxisome, plasma membrane	0.75	0.65
CDX86031	Canola	plasma membrane	0.19	0.65
CDY51257	Canola	plastid	0.56	0.62
CDY28371	Canola	plasma membrane	0.56	0.62
CDX87266	Canola	peroxisome	0.56	0.52
CDY16763	Canola	peroxisome	0.56	0.52
CDY38595	Canola	cytosol, peroxisome, plasma membrane	0.56	0.51
CDX83027	Canola	cytosol, peroxisome, plasma membrane	0.56	0.5
CDY48389	Canola	cytosol, peroxisome, plasma membrane	0.56	0.49
CDX68450	Canola	cytosol, peroxisome, plasma membrane	0.56	0.49
CDY70561	Canola	plasma membrane	0.37	0.37
CDY28441	Canola	cytosol, peroxisome, plasma membrane	0.37	0.35
CDY40280	Canola	plasma membrane	0.37	0.35
CDY25813	Canola	cytosol, peroxisome, plasma membrane	0.37	0.35
CDY45756	Canola	plasma membrane	0.37	0.35
CDY21692	Canola	plasma membrane	0.37	0.35
CDY26715	Canola	plasma membrane	0.37	0.34
CDY56086	Canola	cytosol, peroxisome, plasma membrane	0.37	0.34
CDX83801	Canola	cytosol, peroxisome, plasma membrane	0.37	0.34
CDX81902	Canola	cytosol, peroxisome, plasma membrane	0.37	0.34
CDY53067	Canola	cytosol, peroxisome, plasma membrane	0.37	0.34
CDY30731	Canola	plasma membrane	0.37	0.33
CDY45754	Canola	plasma membrane	0.37	0.33
CDX84344	Canola	plasma membrane	0.37	0.33
CDX96690	Canola	plasma membrane	0.37	0.33
CDY00315	Canola	plasma membrane	0.37	0.33
CDY11647	Canola	plastid	0.37	0.32
CDY38767	Canola	plastid	0.37	0.32
CDY48147	Canola	plasma membrane	0.19	0.18
CDX99152	Canola	plasma membrane	0.19	0.18
CDY51783	Canola	cytosol, peroxisome, plasma membrane	0.19	0.17
CDY36913	Canola	cytosol, peroxisome, plasma membrane	0.19	0.16
CDY21805	Canola	cytosol, peroxisome, plasma membrane	0.19	0.16
CDY69433	Canola	golgi, peroxisome, plastid	0.19	0.16
CDY69519	Canola	plasma membrane	0.0	0.0
CDY69522	Canola	plasma membrane	0.0	0.0
CDY69402	Canola	plasma membrane	0.0	0.0
CDX96007	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY65728	Canola	cytosol	0.0	0.0
CDX86198	Canola	peroxisome	0.0	0.0
CDX81495	Canola	plasma membrane	0.0	0.0
CDX86030	Canola	plasma membrane	0.0	0.0
CDY52504	Canola	plasma membrane	0.0	0.0
CDY52480	Canola	plasma membrane	0.0	0.0
CDX99151	Canola	plasma membrane	0.0	0.0
CDY38766	Canola	plasma membrane	0.0	0.0
CDY04237	Canola	cytosol, peroxisome, plasma membrane	0.0	0.0
CDY05592	Canola	plasma membrane	0.0	0.0
CDY20187	Canola	plasma membrane	0.0	0.0
CDY18499	Canola	plasma membrane	0.0	0.0
CDY16764	Canola	cytosol, mitochondrion, plasma membrane, plastid	0.0	0.0
CDY09846	Canola	plasma membrane	0.0	0.0
CDY12696	Canola	plasma membrane	0.0	0.0
CDY11648	Canola	plasma membrane	0.0	0.0

Protein Annotations

MapMan:35.2	GO:A0A078JSY4	UniProt:A0A078JSY4	EnsemblPlants:CDY68532	ProteinID:CDY68532	ProteinID:CDY68532.1
InterPro:EMC1	InterPro:EMC1_C	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0016020	GO:GO:0016021	GO:GO:0072546	EnsemblPlantsGene:GSBRNA2T00075385001	PFAM:PF07774
PANTHER:PTHR21573	InterPro:Quinoprotein_ADH-like_supfam	SUPFAM:SSF50998	TMHMM:TMhelix	UniParc:UPI0004EEED7C	SEG:seg

Description

BnaCnng59410DBnaCnng59410D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JSY4]

Coordinates

chrLK037494:-:3065..5273

Molecular Weight (calculated)

59659.4 Da

IEP (calculated)

7.768

GRAVY (calculated)

-0.126

Length

536 amino acids

Sequence
(BLAST)

001: GHILKLKGSL LLASPEDVVA IQEMRMKSSG RSKLTRDHNG FRKLFIALTR AGKLFALHTG DGRIVWSTLL NSPACARPSG ISLYQWQVPH HHAMDENPSV
101: LVVGRCGSDS SSPGVLSFVD VYTGKEISSS DIGHSVVQVM PLPLFTDSTE QRLHLIADTD GHVHLYPKTP EALGIFQREF QNVYWYNVEG DDGIIRGHGM
201: KSSCAGETAD EYCFTTRELW TVVFPSESEK IISTLTRKPN EVVHTQAKVS TDQDVLYKYV SRNLLFVATV SPKGAGEIGS VTPEESALVV YLIDTVTGRI
301: LHRLSHQGCQ GPVHAVFSEN WVVYHYFNLR AHKYEVTVVE IYDQSRAENK NVWKLVLGKH NLTAPISSYS RPEMFTKSQS YFFPQSVKTI AVTSTAKGIT
401: SKQLLIGTIG DQILALDKRF VDPRRTLNPS QAEKEEGIIP LTDSLPIIPQ SYITHSLKVE GLRGIVTAPA KLESTTHVFA YGVDLFYTRL APSKTYDSLT
501: DDFSYALLLI TIVALVAAIY ITWALSEKKE LSEKWR

Best Arabidopsis Sequence Match ( AT5G11560.1 )
(BLAST)

001: MAIRVFLTLL LFLSSAILSF SLYEDQAGLT DWHQRYIGKV KHAVFHTQKT GRKRVIVSTE ENVVASLDLR HGEIFWRHVL GTKDAIDGVG IALGKYVITL
101: SSEGSTLRAW NLPDGQMVWE TSLHTAQHSK SLLSVPINLK VDKDYPITVF GGGYLHAVSA IDGEVLWKKD FTAEGFEVQR VLQAPGSSII YVLGFLHSSE
201: AVVYQIDSKS GEVVAQKSTV FPGGFSGEIS SVSSDKVVVL DSTRSILVTI GFIDGDISFQ KTPISDLVED SGTAEILSPL LSNMLAVKVN KRTIFVNVGD
301: KGKLEVVDSL SDETAMSDSL PVADDQEAFA SVHHEGSRIH LMVKLVNDLN NVLLRETIQM DQNRGRVHKV FMNNYIRTDR SNGFRALIVM EDHSLLLLQQ
401: GAIVWSREEG LASVTDVTTA ELPLEKDGVS VAKVEHTLFE WLKGHVLKLK GSLLLASPED VVAIQDLRVK SSGKNKLTRD HNGFRKLILA LTRAGKLFAL
501: HTGDGRIVWS MLLNSPSQSQ SCERPNGVSL YQWQVPHHHA MDENPSVLVV GKCGSDSSAP GVLSFVDVYT GKEISSSDIG HSVVQVMPLP ITDSKEQRLH
601: LIADTVGHVH LYPKTSEALS IFQREFQNVY WYTVEADDGI IRGHVMKGSC SGETADEYCF TTRELWTVVF PSESEKIIST LTRKPNEVVH TQAKVNTDQD
701: LLYKYVSRNL LFVATVSPKG AGEIGSVTPE ESSLVVYLID TITGRILHRL SHQGCQGPVH AVFSENWVVY HYFNLRAHKY EVTVVEIYDQ SRAENKNVWK
801: LILGKHNLTA PITSYSRPEV FTKSQSYFFA QSVKTIAVTS TAKGITSKQL LIGTIGDQIL ALDKRFVDPR RTLNPSQAEK EEGIIPLTDT LPIIPQAYVT
901: HSHKVEGLRG IVTAPSKLES TTHVFAYGVD LFYTRLAPSK TYDSLTDDFS YALLLITIVA LVAAIYITWV LSEKKELSEK WR

Arabidopsis Description

Catalytics [Source:UniProtKB/TrEMBL;Acc:F4JXW9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.