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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY25813 Canola cytosol, peroxisome, plasma membrane 97.71 97.71
CDY28441 Canola cytosol, peroxisome, plasma membrane 96.83 96.83
AT1G27080.1 Thale cress cytosol, golgi, plasma membrane 76.76 75.69
CDY53067 Canola cytosol, peroxisome, plasma membrane 69.54 66.5
CDY56086 Canola cytosol, peroxisome, plasma membrane 69.19 66.5
CDY48389 Canola cytosol, peroxisome, plasma membrane 69.72 65.24
CDY23545 Canola cytosol, peroxisome, plasma membrane 69.72 65.24
CDY11647 Canola plastid 69.72 63.97
CDY38767 Canola plastid 69.89 63.83
KRH74756 Soybean plastid 58.1 53.23
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 57.92 52.89
VIT_01s0026g01490.t01 Wine grape plastid 56.51 51.86
KRH69380 Soybean plastid 57.22 51.67
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 54.75 51.32
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 54.75 51.24
Os01t0913300-01 Rice plasma membrane 47.71 45.17
GSMUA_Achr4P17590_001 Banana plasma membrane 35.21 44.74
HORVU3Hr1G092870.1 Barley plasma membrane 47.18 44.22
TraesCS3B01G454100.1 Wheat plasma membrane 47.01 44.13
TraesCS3D01G414400.1 Wheat plasma membrane 46.83 44.11
TraesCS3D01G414300.1 Wheat plasma membrane 46.48 43.49
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 37.15 43.42
TraesCS3B01G454000.1 Wheat plasma membrane 46.48 43.35
CDY38766 Canola plasma membrane 41.9 43.19
TraesCS3A01G418700.1 Wheat plasma membrane 46.13 43.16
TraesCS3A01G418800.1 Wheat plasma membrane 47.18 43.09
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 43.13 43.06
CDY11648 Canola plasma membrane 41.55 42.83
CDY09846 Canola plasma membrane 31.34 41.49
CDY45756 Canola plasma membrane 41.55 41.33
CDY26715 Canola plasma membrane 41.73 40.86
CDX81902 Canola cytosol, peroxisome, plasma membrane 42.43 40.71
CDY30731 Canola plasma membrane 42.61 40.4
CDX84344 Canola plasma membrane 42.61 40.2
CDY00315 Canola plasma membrane 43.31 40.2
CDX83801 Canola cytosol, peroxisome, plasma membrane 41.73 40.1
CDY21692 Canola plasma membrane 40.49 40.07
CDY45754 Canola plasma membrane 42.08 39.7
CDY36913 Canola cytosol, peroxisome, plasma membrane 42.78 39.51
CDY52480 Canola plasma membrane 32.04 39.48
CDY51783 Canola cytosol, peroxisome, plasma membrane 41.9 39.47
CDX87266 Canola peroxisome 39.44 39.09
CDX68450 Canola cytosol, peroxisome, plasma membrane 42.08 38.86
CDY16763 Canola peroxisome 39.26 38.85
CDX83027 Canola cytosol, peroxisome, plasma membrane 40.85 38.54
CDY21805 Canola cytosol, peroxisome, plasma membrane 42.08 38.49
KXG37624 Sorghum plasma membrane 40.85 38.35
CDY65728 Canola cytosol 13.38 38.19
CDX86198 Canola peroxisome 38.2 38.14
CDY69433 Canola golgi, peroxisome, plastid 42.43 38.01
CDX96690 Canola plasma membrane 40.14 37.56
CDY52504 Canola plasma membrane 37.32 37.06
CDY05592 Canola plasma membrane 37.32 37.06
CDY38595 Canola cytosol, peroxisome, plasma membrane 37.85 36.32
EES13016 Sorghum cytosol, nucleus, plasma membrane 40.32 35.84
CDY07377 Canola cytosol, peroxisome, plasma membrane 37.5 35.74
CDY20187 Canola plasma membrane 18.49 35.71
CDY70561 Canola plasma membrane 33.8 35.29
CDY04237 Canola cytosol, peroxisome, plasma membrane 36.8 35.13
CDX97728 Canola plasma membrane 36.62 35.08
CDY30141 Canola plasma membrane 36.44 34.91
CDY28371 Canola plasma membrane 29.75 34.77
CDY69519 Canola plasma membrane 17.78 34.59
CDY69522 Canola plasma membrane 17.78 34.59
CDY69402 Canola plasma membrane 18.13 34.56
CDY51257 Canola plastid 29.4 34.36
Os04t0660900-01 Rice plasma membrane, plastid 37.85 34.07
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 35.39 33.9
CDY12696 Canola plasma membrane 30.63 33.66
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 20.6 33.62
Zm00001d001976_P001 Maize plastid 39.61 33.58
CDY54537 Canola cytosol, peroxisome, plasma membrane 36.44 33.5
CDX99152 Canola plasma membrane 32.75 33.39
CDY18499 Canola plasma membrane 32.57 33.21
CDX81495 Canola plasma membrane 30.28 33.14
CDX86030 Canola plasma membrane 15.85 33.09
CDY67993 Canola plasma membrane 32.22 32.91
CDX99151 Canola plasma membrane 30.11 30.81
CDY48147 Canola plasma membrane 29.75 30.67
CDX86031 Canola plasma membrane 7.57 27.74
CDX96007 Canola cytosol, peroxisome, plasma membrane 32.75 26.88
CDX69747 Canola plasma membrane 32.75 12.03
CDY68532 Canola cytosol 0.35 0.37
Protein Annotations
MapMan:24.2.2.9GO:A0A078HNZ0UniProt:A0A078HNZ0EnsemblPlants:CDY40280ProteinID:CDY40280ProteinID:CDY40280.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006857GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00069450001InterPro:MFS_trans_sf
PFAM:PF00854InterPro:POT_famScanProsite:PS01022PANTHER:PTHR11654PANTHER:PTHR11654:SF20InterPro:PTR2_symporter_CS
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EE6BB2SEG:seg::
Description
BnaA07g09200DBnaA07g09200D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HNZ0]
Coordinates
chrLK032467:+:235248..238473
Molecular Weight (calculated)
63859.2 Da
IEP (calculated)
8.996
GRAVY (calculated)
0.260
Length
568 amino acids
Sequence
(BLAST)
001: MEVLENAKNP NNSPERKRGG WIAISFILGN ETLERMGTIG LSANFMAYLT NVFHMKLVDA SNVFNLWLGL SNLAPLLGAI ISDAYVGRFK TIAYASFFSL
101: LGLTTVTLTA WLHQLHPPEC NIHRPDSCDR PNKLQLGVLF LGLGFLSIGS GGIRPCSIPF GVDQFDQRTE KGLKGMASYF NWYYLTFSIV LIVSHTVIVY
201: IQDNISWTIG FSIPTGLMAC SIVLFFVGTR FYVYVKSEGS AFSSIARVIL AARKKRNLKL PVEDDGTVEY YDPPLKPGVL SKLPLTNQYK FLDKAAVITE
301: DDLTSAGVPV NKWRLCSVQE VEEVKCLIRI IPVWSAGIIS VVTMSTQVTF IVPQAMKMDR HMGPHFEIPA GSVSVISFIT IGIWLPIYDR VIVPSLWRIR
401: KFRVTLLQRM GIGIVFGIVS MFTAAIVERV RRTQALKMTQ MSVFWLAWQL VLMGLSESFN YIGQIEFFNS QFPEHMRSLA NSLFPLSFAA SHYLTSLLVT
501: TVHKFSGGKD KPDWLDNDLN KGRLDYLYYM IAGLGVVNLV YFWYCARSYQ YKAGSQIEDL AEEKSLVD
Best Arabidopsis Sequence Match ( AT1G27080.1 )
(BLAST)
001: MGVVENRKIL PEKKLGGWRA ITFILGNETL EKLGSIGVSA NFMLYLRNVF HMEPVEAFNV YYLWMGLTNF APLLGALISD AYIGRFKTIA YASLFSILGL
101: MTVTLTACLP QLHPPPCNNP HPDECDDPNK LQLGILFLGL GFLSIGSGGI RPCSIPFGVD QFDQRTEQGL KGVASFFNWY YLTLTMVLIF SHTVVVYLQT
201: VSWVIGFSIP TSLMACAVVL FFVGMRFYVY VKPEGSVFSG IARVIVAARK KRDLKISLVD DGTEEYYEPP VKPGVLSKLP LTDQFKFLDK AAVILDGDLT
301: SEGVPANKWR LCSIQEVEEV KCLIRVVPVW SAGIISIVAM TTQATFMVFQ ATKMDRHMGP HFEIPAASIT VISYITIGIW VPIYEHLLVP FLWRMRKFRV
401: TLLQRMGIGI VFAILSMFTA GFVEGVRRTR ATEMTQMSVF WLALPLILMG LCESFNFIGL IEFFNSQFPE HMRSIANSLF PLSFAAANYL SSLLVTTVHK
501: VSGTKDHPDW LNKDLDRGKL DYFYYLIAVL GVVNLVYFWY CAHRYQYKAG SQIEDFNEEK SLLDIEPNQR HDQSPS
Arabidopsis Description
NPF2.12Protein NRT1/ PTR FAMILY 2.12 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFX9]
SUBAcon: [plasma membrane,golgi,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.