Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56086 Canola cytosol, peroxisome, plasma membrane 98.32 98.82
CDY38767 Canola plastid 94.11 89.87
CDY11647 Canola plastid 93.27 89.5
CDY48389 Canola cytosol, peroxisome, plasma membrane 87.71 85.83
CDY23545 Canola cytosol, peroxisome, plasma membrane 87.37 85.5
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 87.71 84.03
CDY40280 Canola plasma membrane 66.5 69.54
CDY25813 Canola cytosol, peroxisome, plasma membrane 66.33 69.37
CDY28441 Canola cytosol, peroxisome, plasma membrane 66.16 69.19
KRH74756 Soybean plastid 61.45 58.87
KRH69380 Soybean plastid 60.61 57.23
VIT_01s0026g01490.t01 Wine grape plastid 59.43 57.03
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 59.09 56.43
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 55.72 54.62
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 54.88 53.71
GSMUA_Achr4P17590_001 Banana plasma membrane 37.37 49.66
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 39.23 47.94
CDY38766 Canola plasma membrane 43.77 47.19
Os01t0913300-01 Rice plasma membrane 47.31 46.83
CDY11648 Canola plasma membrane 43.27 46.64
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 43.6 45.52
HORVU3Hr1G092870.1 Barley plasma membrane 46.13 45.21
TraesCS3B01G454100.1 Wheat plasma membrane 45.45 44.63
TraesCS3D01G414400.1 Wheat plasma membrane 45.29 44.61
CDY45756 Canola plasma membrane 42.76 44.48
TraesCS3B01G454000.1 Wheat plasma membrane 45.12 44.01
TraesCS3D01G414300.1 Wheat plasma membrane 44.95 43.99
TraesCS3A01G418700.1 Wheat plasma membrane 44.95 43.99
CDY09846 Canola plasma membrane 31.65 43.82
CDY00315 Canola plasma membrane 44.61 43.3
TraesCS3A01G418800.1 Wheat plasma membrane 45.29 43.25
CDY30731 Canola plasma membrane 43.6 43.24
CDX84344 Canola plasma membrane 43.6 43.02
CDX68450 Canola cytosol, peroxisome, plasma membrane 44.44 42.93
CDY51783 Canola cytosol, peroxisome, plasma membrane 43.43 42.79
CDY26715 Canola plasma membrane 41.75 42.76
CDY36913 Canola cytosol, peroxisome, plasma membrane 43.94 42.44
CDX83027 Canola cytosol, peroxisome, plasma membrane 42.76 42.19
CDY45754 Canola plasma membrane 42.76 42.19
CDY21692 Canola plasma membrane 40.74 42.16
CDX81902 Canola cytosol, peroxisome, plasma membrane 41.92 42.06
CDX83801 Canola cytosol, peroxisome, plasma membrane 41.41 41.62
CDY69433 Canola golgi, peroxisome, plastid 43.6 40.85
CDY21805 Canola cytosol, peroxisome, plasma membrane 42.42 40.58
CDY16763 Canola peroxisome 38.89 40.24
CDX87266 Canola peroxisome 38.72 40.14
CDX96690 Canola plasma membrane 40.91 40.03
CDY52480 Canola plasma membrane 30.3 39.05
CDY69519 Canola plasma membrane 19.19 39.04
CDY69522 Canola plasma membrane 19.19 39.04
CDX86198 Canola peroxisome 37.37 39.02
CDY52504 Canola plasma membrane 37.37 38.81
CDY05592 Canola plasma membrane 37.37 38.81
CDY38595 Canola cytosol, peroxisome, plasma membrane 38.38 38.51
CDY20187 Canola plasma membrane 19.02 38.44
KXG37624 Sorghum plasma membrane 38.55 37.85
CDY16764 Canola cytosol, mitochondrion, plasma membrane, plastid 37.21 37.27
CDY07377 Canola cytosol, peroxisome, plasma membrane 37.37 37.25
CDY04237 Canola cytosol, peroxisome, plasma membrane 37.04 36.97
CDY28371 Canola plasma membrane 29.97 36.63
CDY70561 Canola plasma membrane 33.5 36.58
CDY30141 Canola plasma membrane 36.36 36.42
CDX97728 Canola plasma membrane 36.2 36.26
CDX91207 Canola cytosol, endoplasmic reticulum, plasma membrane 21.21 36.21
CDY54537 Canola cytosol, peroxisome, plasma membrane 37.54 36.08
CDY51257 Canola plastid 29.46 36.01
EES13016 Sorghum cytosol, nucleus, plasma membrane 38.55 35.84
Os04t0660900-01 Rice plasma membrane, plastid 38.05 35.82
CDY65728 Canola cytosol 11.95 35.68
CDX99152 Canola plasma membrane 32.15 34.29
CDY69402 Canola plasma membrane 17.17 34.23
Zm00001d001976_P001 Maize plastid 38.38 34.03
CDX81495 Canola plasma membrane 29.46 33.72
CDY12696 Canola plasma membrane 29.29 33.66
CDY18499 Canola plasma membrane 31.48 33.57
CDY67993 Canola plasma membrane 29.8 31.83
CDX86030 Canola plasma membrane 14.31 31.25
CDY48147 Canola plasma membrane 28.45 30.67
CDX99151 Canola plasma membrane 28.62 30.63
CDX86031 Canola plasma membrane 7.74 29.68
CDX96007 Canola cytosol, peroxisome, plasma membrane 31.65 27.17
CDX69747 Canola plasma membrane 30.47 11.71
CDY68532 Canola cytosol 0.34 0.37
Protein Annotations
MapMan:24.2.2.9GO:A0A078ISV9UniProt:A0A078ISV9EnsemblPlants:CDY53067ProteinID:CDY53067ProteinID:CDY53067.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00008493001InterPro:MFS_trans_sfPFAM:PF00854
InterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF20SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI0004EEB6B0
SEG:seg:::::
Description
BnaCnng24110DBnaCnng24110D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ISV9]
Coordinates
chrLK033161:-:30983..36590
Molecular Weight (calculated)
65671.3 Da
IEP (calculated)
8.789
GRAVY (calculated)
0.268
Length
594 amino acids
Sequence
(BLAST)
001: MDVSDSHSQK SSPHSILDAE KVEKKPGGWR AVTFILGNET LERLGTIGLL SNFMVYLTRV FHLEQVDASN VINIWSGFSN LTPLVGAFIS DAYVGRFKTI
101: AFASFATLLG LVTLTLTASL PQLHPETCNS KDPVSCGGPN KLQFGILLLG LGFLSIGSGG IRPCSIPFGV DQFDQRTEEG IKGVASFFNW YYMTFTVVLI
201: ITQTVVVYIQ DQVSWIIGFS VPTGLMACAV VMFFAGMKLY VYVKPEGSIF SGIAQVVVAA RKKRKMKLPA EDDGTVTYYD PPVKDSVLSK LHHSNQYRFL
301: DKAAVIIEGD LTSEGVPANK WRLCSIQEVE EVKCLIRIVP VWSAGIISLA AMTQQGTFTV SQALKMDRHI GPNFEIPAGS LSVISLLTIG VFLPLYDRVL
401: VPFFRRITSH KSGITLLQRI GTGIVFAILS MIVAGLVERM RRMRSINAGD PTGMTPMSVF WLSPQLILMG LCEAFNIIGQ IEFFNSQFPE HMRSIANSLF
501: SLSFAGSNYL SSLIVTTVHK FSGGHDRPDW LNKNLNAGKL DYFYYLIAVL GVFNLVYFWY CAQGYRYKVG LQMGGFGEDK SFSDVEMSSK KQLK
Best Arabidopsis Sequence Match ( AT1G69870.1 )
(BLAST)
001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
Arabidopsis Description
NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.