Factsheet for Zm00001d001976_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	peroxisome, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13016	Sorghum	cytosol, nucleus, plasma membrane	81.04	84.98
Os04t0660900-01	Rice	plasma membrane, plastid	62.84	66.72
Zm00001d031213_P001	Maize	plasma membrane	30.15	39.69
CDY40280	Canola	plasma membrane	33.58	39.61
CDY25813	Canola	cytosol, peroxisome, plasma membrane	33.43	39.44
CDY28441	Canola	cytosol, peroxisome, plasma membrane	33.28	39.26
VIT_01s0026g01490.t01	Wine grape	plastid	35.97	38.93
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	32.99	38.91
AT1G27080.1	Thale cress	cytosol, golgi, plasma membrane	33.43	38.89
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	34.03	38.58
CDY56086	Canola	cytosol, peroxisome, plasma membrane	34.03	38.58
PGSC0003DMT400045466	Potato	cytosol, peroxisome, plasma membrane	34.78	38.45
CDY53067	Canola	cytosol, peroxisome, plasma membrane	34.03	38.38
Solyc05g006920.2.1	Tomato	cytosol, peroxisome, plasma membrane	34.48	38.06
KRH74756	Soybean	plastid	35.07	37.9
CDY48389	Canola	cytosol, peroxisome, plasma membrane	34.18	37.73
Zm00001d033528_P003	Maize	cytosol, peroxisome, plasma membrane	32.84	37.35
AT1G69870.1	Thale cress	cytosol, nucleus, plasma membrane	34.48	37.26
Zm00001d013529_P002	Maize	plasma membrane	32.84	37.23
KRH69380	Soybean	plastid	34.93	37.2
CDY11647	Canola	plastid	34.33	37.16
CDY23545	Canola	cytosol, peroxisome, plasma membrane	33.58	37.07
CDY38767	Canola	plastid	34.33	36.98
Bra016259.1-P	Field mustard	plastid	34.33	36.98
KRG99182	Soybean	plasma membrane	30.75	35.89
Zm00001d038181_P001	Maize	plasma membrane	32.24	35.88
KRG99183	Soybean	cytosol, peroxisome, plasma membrane, plastid	33.28	35.85
AT1G69860.1	Thale cress	plasma membrane	29.4	35.5
CDY38766	Canola	plasma membrane	29.1	35.39
CDY11648	Canola	plasma membrane	29.1	35.39
Bra016260.1-P	Field mustard	plasma membrane	28.96	35.21
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	16.27	34.71
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	30.3	34.18
Zm00001d038185_P001	Maize	plasma membrane	26.72	34.1
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	17.31	33.72
Zm00001d038186_P002	Maize	cytosol, peroxisome, plasma membrane	29.85	33.5
Zm00001d038179_P001	Maize	cytosol, nucleus, plasma membrane	14.93	33.0
Zm00001d043374_P001	Maize	plasma membrane	27.91	31.53
Zm00001d050456_P001	Maize	plasma membrane	22.09	28.96
Zm00001d043375_P001	Maize	plasma membrane	26.87	28.17

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:103645813	MapMan:24.2.2.9	UniProt:A0A1D6DUZ1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf	ProteinID:ONM12617.1	PFAM:PF00854
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF156	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0004DE7BC8
EnsemblPlantsGene:Zm00001d001976	EnsemblPlants:Zm00001d001976_P001	EnsemblPlants:Zm00001d001976_T001	SEG:seg	:	:

Description

Protein NRT1/ PTR FAMILY 2.13

Coordinates

chr2:+:3771594..3773923

Molecular Weight (calculated)

72224.3 Da

IEP (calculated)

9.605

GRAVY (calculated)

0.248

Length

670 amino acids

Sequence
(BLAST)

001: MQISSTATEA QHTTPACSCS TRRRSIDFPH LWRGTGFRVN MCEGGRPEAA SMASHRRPQS AGLSSGLPVP EQEAAGGGGG GAAEATRRPR GWRAVAFIIG
101: FYAAASIAGN AFSFSLTSYL IGRYNMKQNA ATNVNNIFSG TYNFSPVIGA FVADAFWGRF RTLLVGTVFG VAAMAVITLS ATVHQLKPPP CSPLAQQAGT
201: CAAPSALQRA VLYLGMGLLV VSAGGTSPTG LPFGADQFDE RKEQHSKQGG LARFYNWYYA VAMVATFLAL TVVLYVQVKV SWGLGFAIPT ALMLIAFLVF
301: LVGTKLYVYV PPEGSIFSSV ARVFVASCRK WRLRLPHPDD ARRQEELLYD PPAVGIGGGR RVFKLPLTLQ LSFLNKAAIV TDAAAEIRPD GAPARPWSLC
401: SVQQVEEAKC LLKIIPVWIS GTVWFTMVTE LTNYTFLQAS TMDLHMGKHF TVPPASIVAV FYLAVALFVP VYDLLVSRAT LRRGITLLQR QGAGLVVAAL
501: AFVVAAAVEP RRRRSALAHG DGMSPLSVFL LAPQLAVMGV SGGFTLVGQV EFYNTQFPEQ MRTLANAVFY CAQGISSYLA TLVVNIVNAR TRRHGGSAGW
601: VTDDINAGRI DYFYYAMAVL SGANFVYFLV CSYFYQYKGE QAADTPPARC EPATDSDSRT SESAAALLRT

Best Arabidopsis Sequence Match ( AT1G18880.1 )
(BLAST)

001: MEVEKTEKNI AEDDESKIIY RGWKVMPFII GNETFEKLGI VGSSSNLVIY LTTVFNMKSI TAAKVVNIYG GTSNFGTIVA AFLCDSYFGR YKTLSFAMIA
101: CFLGSVAMDL TAVIHPLHPA QCAKEIGSVC NGPSIGQIMF LAGAMVLLVI GAGGIRPCNL PFGADQFDPK TKEGKRGIES FFNWYFFTFT FAQMVSLTLI
201: VYVQSNVSWS IGLAIPAILM LLGCIIFFAG SKLYVKVKAS GSPIHSITRV IVVAIKKRRL KPVGPNELYN YIASDFKNSK LGHTEQFRFL DKSAIQTQDD
301: KLNKDGSPVD AWKLCSMQQV EEVKCVIRVL PVWLSAALFY LAYIQQTTYT IFQSLQSDRR LGPGSFQIPA GSYTVFLMLG MTIFIPIYDR VLVPFLRKYT
401: GRDGGITQLQ RVGAGLFLCI TSMMVSAIVE QYRRKVALTK PTLGLAPRKG AISSMSGMWL IPQLVLMGIA DALAGVGQME FYYKQFPENM RSFAGSLYYC
501: GIGLASYLST FLLSAVHDTT EGFSGGSWLP EDLNKGRLEY FYFLVAGMMT LNLAYFLLVS HWYRYKDVVA KDKDMDKTSA EFDKVSV

Arabidopsis Description

NPF2.9Protein NRT1/ PTR FAMILY 2.9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M9V7]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.