Factsheet for Zm00001d045667_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, peroxisome, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88193	Sorghum	cytosol, golgi, peroxisome	94.61	94.45
TraesCS7D01G209200.1	Wheat	cytosol, nucleus, peroxisome	82.66	79.45
HORVU7Hr1G042120.1	Barley	cytosol	82.32	79.25
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	81.48	78.96
Os06t0264500-01	Rice	extracellular	79.29	78.89
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	81.99	78.8
GSMUA_Achr5P24480_001	Banana	plasma membrane	68.52	69.69
KRH75378	Soybean	plasma membrane	61.78	63.72
VIT_01s0011g03400.t01	Wine grape	plasma membrane	61.62	62.78
Solyc05g009500.2.1	Tomato	plasma membrane	59.6	61.78
PGSC0003DMT400037693	Potato	plasma membrane	60.1	61.55
KRH75379	Soybean	plasma membrane	49.66	61.46
CDY38595	Canola	cytosol, peroxisome, plasma membrane	60.77	60.98
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.44	60.64
AT1G68570.1	Thale cress	cytosol, peroxisome, plasma membrane	60.77	60.57
Bra038366.1-P	Field mustard	plasma membrane	46.13	59.05
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.6	58.61
CDY69402	Canola	plasma membrane	29.12	58.05
CDY07377	Canola	cytosol, peroxisome, plasma membrane	58.25	58.05
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	58.08	57.89
CDY65728	Canola	cytosol	19.19	57.29
CDY04237	Canola	cytosol, peroxisome, plasma membrane	57.07	56.97
CDY54537	Canola	cytosol, peroxisome, plasma membrane	59.26	56.96
Zm00001d038179_P001	Maize	cytosol, nucleus, plasma membrane	27.61	54.13
Zm00001d038181_P001	Maize	plasma membrane	53.54	52.82
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	27.61	52.23
Zm00001d038185_P001	Maize	plasma membrane	45.96	52.0
Zm00001d038186_P002	Maize	cytosol, peroxisome, plasma membrane	52.19	51.93
CDX96007	Canola	cytosol, peroxisome, plasma membrane	50.17	43.06
Zm00001d031213_P001	Maize	plasma membrane	35.86	41.85
Zm00001d033528_P003	Maize	cytosol, peroxisome, plasma membrane	37.54	37.86
Zm00001d013529_P002	Maize	plasma membrane	37.04	37.23
Zm00001d043374_P001	Maize	plasma membrane	34.85	34.91
Zm00001d043375_P001	Maize	plasma membrane	34.18	31.77
Zm00001d001976_P001	Maize	plastid	34.18	30.3
Zm00001d050456_P001	Maize	plasma membrane	24.92	28.96

Protein Annotations

Gene3D:1.20.1250.20	EntrezGene:100191990	MapMan:11.6.4.1	MapMan:24.2.2.9	ProteinID:AQL02946.1	EMBL:BT065942
UniProt:C0PCC3	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005886	GO:GO:0006810	GO:GO:0008150	GO:GO:0010336	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	GO:GO:0097708	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF178	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI000194B131	EnsemblPlantsGene:Zm00001d045667	EnsemblPlants:Zm00001d045667_P001	EnsemblPlants:Zm00001d045667_T001	SEG:seg	:

Description

Protein NRT1/ PTR FAMILY 3.1

Coordinates

chr9:+:32539610..32542534

Molecular Weight (calculated)

64270.9 Da

IEP (calculated)

8.000

GRAVY (calculated)

0.283

Length

594 amino acids

Sequence
(BLAST)

001: MAMEEAGKMT CRKKGGLRTM PFIFANEVAE KLAVVGFSTN MLTYLTTQLH MPLAKAATTL TNFGGTSAAT PLIGAFLADA CIGRFWTIAA ASVVYQAGMA
101: LLTVSAALPR FRPAPCKPGG AVACQEAAPW QLAVLYVSLL LNAVGAGGYR PCIVAFGADQ FDESRAAERA RSWGFFNWYY FCNGASMLLA VTAVVYVQDN
201: VGWGWGLGVP AFCMGVSVAA FVAGYPMYRR LEPAGSPFTR LAQVVVAAVK KRRLPAADVD PALLYEDDEL DAPISMYGKL VHTDQLSFFD RAAIVTDGDL
301: VTLTDADSGK PSTAPVPDLW RLSTVHRVEE LKSVIRMGPI WAAGILVITG SSTQNTFSLQ QASTMDRRLA PGLSTFEIPA GSMTVFGLLA MLFTLFVYDR
401: ALIRVARRFT GLDRGISFLH RMGVGFAISV LATLVAGFVE RHRRDAAAAA GATDAGTSPL SAYWLVPQYA LHGVAEAFTS VGHLEFMYDQ APESMRSTAT
501: ALFWLSISLG SYASTLLVDA VHRWSAGPGG ANWLPDNINH GKLDYFYWVV TVLQVMNLVY YAICAKRFTF KPVQLHKKEE EEGGKALVEL QEKV

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.