Factsheet for Os06t0264500-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
vacuole 2
extracellular 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

extracellular: 23159799

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88193	Sorghum	cytosol, golgi, peroxisome	79.56	79.83
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	78.89	79.29
HORVU7Hr1G042120.1	Barley	cytosol	78.89	76.34
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	77.89	75.86
TraesCS7D01G209200.1	Wheat	cytosol, nucleus, peroxisome	78.39	75.73
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	77.89	75.24
GSMUA_Achr5P24480_001	Banana	plasma membrane	67.84	69.35
KRH75378	Soybean	plasma membrane	59.8	61.98
CDY38595	Canola	cytosol, peroxisome, plasma membrane	60.8	61.32
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	60.47	60.98
Solyc05g009500.2.1	Tomato	plasma membrane	58.12	60.56
CDY69402	Canola	plasma membrane	30.15	60.4
PGSC0003DMT400037693	Potato	plasma membrane	58.63	60.34
VIT_01s0011g03400.t01	Wine grape	plasma membrane	58.79	60.21
AT1G68570.1	Thale cress	cytosol, peroxisome, plasma membrane	59.97	60.07
CDY65728	Canola	cytosol	19.93	59.8
KRH75379	Soybean	plasma membrane	47.91	59.58
Bra038366.1-P	Field mustard	plasma membrane	46.06	59.27
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	59.3	58.61
CDY07377	Canola	cytosol, peroxisome, plasma membrane	57.79	57.89
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	57.45	57.55
CDY54537	Canola	cytosol, peroxisome, plasma membrane	59.3	57.28
CDY04237	Canola	cytosol, peroxisome, plasma membrane	56.45	56.64
Os05t0410500-01	Rice	cytosol, plasma membrane	52.93	54.58
Os05t0410900-02	Rice	plasma membrane	51.09	51.0
Os05t0411100-00	Rice	cytosol, nucleus, plasma membrane	52.76	50.97
Os05t0410800-01	Rice	cytosol, extracellular, mitochondrion	17.59	47.3
CDX96007	Canola	cytosol, peroxisome, plasma membrane	51.26	44.22
Os12t0638300-01	Rice	extracellular, plasma membrane	41.21	41.91
Os12t0638200-01	Rice	cytosol, endoplasmic reticulum, peroxisome	39.2	39.8
Os03t0687000-02	Rice	plasma membrane	38.86	39.52
Os01t0960900-00	Rice	cytosol	17.59	37.91
Os01t0761400-01	Rice	plasma membrane	36.18	37.63
Os05t0338900-00	Rice	plasma membrane	12.56	36.59
Os07t0190650-00	Rice	cytosol, peroxisome, plasma membrane	37.86	36.57
Os01t0913300-01	Rice	plasma membrane	35.18	35.0
Os01t0761500-01	Rice	plasma membrane	34.51	34.92
Os04t0660900-01	Rice	plasma membrane, plastid	33.33	31.54
Os07t0190600-01	Rice	cytosol, plastid	0.17	0.18
Os01t0960800-01	Rice	mitochondrion	0.0	0.0

Protein Annotations

MapMan:11.6.4.1	MapMan:24.2.2.9	EMBL:AK120596	ProteinID:BAD54367.1	ProteinID:BAD54372.1	ProteinID:BAF19249.1
ProteinID:BAS97139.1	ProteinID:EEE65483.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006857	GO:GO:0008150	GO:GO:0010336
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:0097708	InterPro:MFS_trans_sf
EnsemblPlantsGene:Os06g0264500	EnsemblPlants:Os06t0264500-01	PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654
PANTHER:PTHR11654:SF178	InterPro:PTR2_symporter_CS	UniProt:Q5Z6P7	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0000447004
SEG:seg	:	:	:	:	:

Description

TGF-beta receptor, type I/II extracellular region family protein. (Os06t0264500-01)

Coordinates

chr6:+:8739433..8744022

Molecular Weight (calculated)

65094.7 Da

IEP (calculated)

7.825

GRAVY (calculated)

0.208

Length

597 amino acids

Sequence
(BLAST)

001: MAEEEEAKKS KMRKKGGFRT MPFIFANEVA EKLAVLGFTT NMLMYLTRQL HMPLAKAATT LTNFGGVSAM TPLIGAFLAD SLVGRFWTIA AASLIYQVGM
101: LLLTVSAAMP VFRPPPCSGA GGAGACDEAA PWQLAVLYAA LLLNALGAGG YRPCVVAFGA DQFDESEAAE RARTWGFFNW YYFCNGASQL VAVTAVVYVQ
201: DNVGWGWGLG VPTFCMAVSV VAFVAGYPLY RRLHPSGSPF TRLAQVVVAA VRKRRVPTDA DDAAALYEND DMDAPISLYG KLVHTEQLSF FDRAAIVTDG
301: DLTTDTSNGK PSLSPIPKPW RLSTVHRVEE LKSLLRMGPI WAAGILVITA YSQQHTFALQ QASTMDRRLA PGLSSFQIPA GSMTVFTLLA MLTTLLAYDR
401: VLVPLARRVT GLDRGISYLH RMGVGFAISV AATLVAGFVE RHRRESAAAA GTTDAGTSPL SAYWLVPQYA LHGMAEAFNS VGHLEFMYDQ SPESMRSMAT
501: ALFWLSISLG SYVSTMLISA VHRWSAGADG SNWLPDNINR GRLDYFYWIV ALLQVLNLAY YAICARCYLF KPLQLREVDD DAKPQIELQE KASPLSH

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.