Factsheet for GSMUA_Achr5P24480_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
vacuole 3
peroxisome 1
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	plastid
EpiLoc:	vacuole
MultiLoc:	peroxisome
Plant-mPloc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88193	Sorghum	cytosol, golgi, peroxisome	70.55	69.24
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	69.69	68.52
VIT_01s0011g03400.t01	Wine grape	plasma membrane	67.81	67.92
Os06t0264500-01	Rice	extracellular	69.35	67.84
KRH75378	Soybean	plasma membrane	66.61	67.53
Solyc05g009500.2.1	Tomato	plasma membrane	66.1	67.36
Bra004320.1-P	Field mustard	cytosol, peroxisome, plasma membrane	68.15	67.23
CDY38595	Canola	cytosol, peroxisome, plasma membrane	67.81	66.89
HORVU7Hr1G042120.1	Barley	cytosol	70.38	66.61
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	70.38	66.5
CDY69402	Canola	plasma membrane	33.9	66.44
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	69.69	66.39
TraesCS7D01G209200.1	Wheat	cytosol, nucleus, peroxisome	70.21	66.34
PGSC0003DMT400037693	Potato	plasma membrane	65.75	66.21
AT1G68570.1	Thale cress	cytosol, peroxisome, plasma membrane	67.29	65.94
CDY65728	Canola	cytosol	22.43	65.83
Bra038366.1-P	Field mustard	plasma membrane	51.54	64.87
KRH75379	Soybean	plasma membrane	53.25	64.79
CDY07377	Canola	cytosol, peroxisome, plasma membrane	65.24	63.93
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.1	63.91
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	65.07	63.76
CDY54537	Canola	cytosol, peroxisome, plasma membrane	66.1	62.46
CDY04237	Canola	cytosol, peroxisome, plasma membrane	63.18	62.02
GSMUA_Achr8P21720_001	Banana	nucleus	57.19	54.22
CDX96007	Canola	cytosol, peroxisome, plasma membrane	56.51	47.69
GSMUA_Achr4P17590_001	Banana	plasma membrane	30.65	40.04
GSMUA_Achr5P15010_001	Banana	cytosol, peroxisome, plasma membrane	38.18	39.82
GSMUA_Achr5P15030_001	Banana	cytosol	31.85	39.24
GSMUA_Achr4P22320_001	Banana	plasma membrane	33.73	38.93
GSMUA_Achr2P12500_001	Banana	extracellular, mitochondrion, plasma membrane, plastid	32.19	38.68
GSMUA_Achr7P01710_001	Banana	cytosol, peroxisome, plasma membrane	37.5	38.49
GSMUA_Achr9P06310_001	Banana	plasma membrane	38.18	38.18
GSMUA_Achr10P...	Banana	plasma membrane	28.6	35.01
GSMUA_Achr6P15780_001	Banana	plasma membrane	28.94	33.87

Protein Annotations

MapMan:11.6.4.1	MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005886	GO:GO:0006810	GO:GO:0006857	GO:GO:0008150	GO:GO:0010336
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:0097708	EnsemblPlantsGene:GSMUA_Achr5G24480_001
EnsemblPlants:GSMUA_Achr5P24480_001	EnsemblPlants:GSMUA_Achr5T24480_001	InterPro:IPR020846	UniProt:M0T1C3	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	ScanProsite:PS01022	PANTHER:PTHR11654	PANTHER:PTHR11654:SF178	InterPro:PTR2_symporter_CS
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI000296BBFF	SEG:seg	:	:

Description

Putative Peptide transporter PTR5 [Source:GMGC_GENE;Acc:GSMUA_Achr5G24480_001]

Coordinates

chr5:+:25806149..25809191

Molecular Weight (calculated)

64448.1 Da

IEP (calculated)

9.034

GRAVY (calculated)

0.199

Length

584 amino acids

Sequence
(BLAST)

001: MEVRGQERSR SLNDERRKGG LKTLPFIFAN EVSEKLAVVG FSANMISYLT QQLHMPLTKA ANTLTNFSGT ASLTPLLGAF LADAFVGRFW TIAVASIVYQ
101: IGMITLTISA ALPLFRPPQC TGDHNCEEAS AWQLAVLYVA LLLNAIGAGG IRPCVVAFGA DQFDESDPKE KTKTWSFFNW YYFCMGASIL LAVTVVVYIQ
201: DNVGWGWGLG VPTIAMGISV VSFAAGYPMY RRLEPSGSPF TRLAQVAVAA VRKRKVAMVA DPSCLYENDD MDAPISLCGK LVHTKQLSFL DKAAIVTADD
301: QATENSGSRP NPWRLSTVHR VEELKSVIRM APIWAAGILV ITAFAQQNTF SIQQARTMER RLSPRSAFSI PPGSMTVFTM LAMLLTLSLY DRAIVPLARR
401: FTGLHRGISF LHRMGVGFAF SAVATLVAGF VEVRRKRAAA SHGLLDDSAA TIPISAFWLV PQYALNGIAE AFTSVGHLEF FYDQAPESMR STATALFWMS
501: ISAGSYFSTL LVSMVHRYSA GEDGSNWLPD NLNRGRLEYL YWIITFLQVL NLLYYMICAK YYTFKPVQSR QRTDEGAVEL NNKV

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.