Factsheet for Bra004320.1-P

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

plastid 1
vacuole 2
cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY38595	Canola	cytosol, peroxisome, plasma membrane	97.47	97.47
AT1G68570.1	Thale cress	cytosol, peroxisome, plasma membrane	92.57	91.95
Bra038367.1-P	Field mustard	cytosol, peroxisome, plasma membrane	91.05	89.24
Bra004030.1-P	Field mustard	cytosol, peroxisome, plasma membrane	89.02	88.42
Bra038366.1-P	Field mustard	plasma membrane	69.09	88.15
KRH75378	Soybean	plasma membrane	73.31	75.35
KRH75379	Soybean	plasma membrane	57.77	71.25
Solyc05g009500.2.1	Tomato	plasma membrane	68.75	71.03
VIT_01s0011g03400.t01	Wine grape	plasma membrane	69.43	70.5
PGSC0003DMT400037693	Potato	plasma membrane	68.24	69.66
GSMUA_Achr5P24480_001	Banana	plasma membrane	67.23	68.15
EER88193	Sorghum	cytosol, golgi, peroxisome	61.49	61.18
Os06t0264500-01	Rice	extracellular	60.98	60.47
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	60.64	60.44
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	62.84	60.19
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	62.16	60.03
TraesCS7D01G209200.1	Wheat	cytosol, nucleus, peroxisome	62.33	59.71
HORVU7Hr1G042120.1	Barley	cytosol	61.99	59.48
Bra007886.1-P	Field mustard	cytosol, peroxisome, plasma membrane	38.68	38.75
Bra027185.1-P	Field mustard	plasma membrane	38.68	38.62
Bra012429.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.49	38.03
Bra025695.1-P	Field mustard	plasma membrane	36.82	37.59
Bra016259.1-P	Field mustard	plastid	39.19	37.3
Bra035886.1-P	Field mustard	plasma membrane	31.08	37.02
Bra031054.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.99	36.99
Bra033884.1-P	Field mustard	plasma membrane	15.2	36.14
Bra018952.1-P	Field mustard	plasma membrane	36.99	36.14
Bra010111.1-P	Field mustard	plasma membrane	35.81	34.64
Bra018096.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.98	34.63
Bra035885.1-P	Field mustard	peroxisome	32.77	34.4
Bra020609.1-P	Field mustard	plasma membrane	33.11	34.27
Bra033955.1-P	Field mustard	plasma membrane	31.76	34.24
Bra029248.1-P	Field mustard	plasma membrane	35.3	34.15
Bra019521.1-P	Field mustard	plasma membrane	35.14	34.04
Bra021295.1-P	Field mustard	plasma membrane	31.93	33.93
Bra009996.1-P	Field mustard	peroxisome	32.6	33.92
Bra033782.1-P	Field mustard	cytosol, peroxisome, plasma membrane	35.14	33.82
Bra033836.1-P	Field mustard	plasma membrane	29.39	33.33
Bra003979.1-P	Field mustard	cytosol, peroxisome, plasma membrane	19.26	33.14
Bra016260.1-P	Field mustard	plasma membrane	30.74	33.03
Bra021168.1-P	Field mustard	plasma membrane	38.34	26.06
Bra016534.1-P	Field mustard	plastid	36.32	20.83
Bra038280.1-P	Field mustard	plasma membrane	29.73	15.76
Bra008953.1-P	Field mustard	plasma membrane	31.08	11.9

Protein Annotations

MapMan:11.6.4.1	MapMan:24.2.2.9	EnsemblPlantsGene:Bra004320	EnsemblPlants:Bra004320.1	EnsemblPlants:Bra004320.1-P	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:M4CJD6	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam
PANTHER:PTHR11654	PANTHER:PTHR11654:SF178	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0002541753	SEG:seg

Description

AT1G68570 (E=2e-312) | proton-dependent oligopeptide transport (POT) family protein

Coordinates

chrA07:+:17977510..17983047

Molecular Weight (calculated)

65732.4 Da

IEP (calculated)

9.117

GRAVY (calculated)

0.228

Length

592 amino acids

Sequence
(BLAST)

001: MEEQSKNKIS EEEKQLHGKR SRPKGGLITM PFIFANEICE KLAVVGVHAN MISYLTTQLH LPITKAANTL TNFGGTSSLT PLLGAFVADS FAGRFWTITF
101: ASIIYQIGMT LLTISAILPT LRPPPCTGEE VCVVADTAQL SVLYIALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAALVAVT
201: VLVYIQDNVG WGLGLGIPTV AMFLSVIAFV GGFKLYRHLD PSGSPFTRLI QVAVAAFRKR KLMMVSDPTL LYTNDEIDAP ISLGGILTHT KHMSFLDKAA
301: IITEQDNLKP GQIPNPWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTESF QIPAGSMSVF TTVAMLSTIV FYDRVFVKIA
401: RKFTGLERGI TFLHRMGIGF VISIVATLVA GFVEIKRKRV AIEHGLLDKP HTMVPISFLW LVPQYSLHGI AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHRF SAKPDGSNWL PDNNLNRGRL EYFYWVITML QAVNLVYYLW CAKIYTYKPV QVHHSKEENS PVKNELQLSN KN

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.