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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • cytosol 2
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, peroxisome, secretory
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:vacuole
PProwler:secretory
PTS1:peroxisome
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY56086 Canola cytosol, peroxisome, plasma membrane 99.83 99.83
Bra016259.1-P Field mustard plastid 94.92 90.19
AT1G69870.1 Thale cress cytosol, nucleus, plasma membrane 87.65 83.55
Bra003979.1-P Field mustard cytosol, peroxisome, plasma membrane 46.7 80.23
Bra012429.1-P Field mustard cytosol, peroxisome, plasma membrane 66.16 68.84
KRH74756 Soybean plastid 61.59 58.71
KRH69380 Soybean plastid 60.74 57.07
VIT_01s0026g01490.t01 Wine grape plastid 59.73 57.03
KRG99183 Soybean cytosol, peroxisome, plasma membrane, plastid 59.39 56.43
PGSC0003DMT400045466 Potato cytosol, peroxisome, plasma membrane 55.5 54.13
Solyc05g006920.2.1 Tomato cytosol, peroxisome, plasma membrane 54.82 53.38
GSMUA_Achr4P17590_001 Banana plasma membrane 37.73 49.89
GSMUA_Achr2P12500_001 Banana extracellular, mitochondrion, plasma membrane, plastid 39.59 48.15
Bra016260.1-P Field mustard plasma membrane 43.99 47.19
Os01t0913300-01 Rice plasma membrane 47.72 47.0
Bra035886.1-P Field mustard plasma membrane 38.58 45.88
GSMUA_Achr7P01710_001 Banana cytosol, peroxisome, plasma membrane 43.82 45.52
HORVU3Hr1G092870.1 Barley plasma membrane 46.36 45.21
TraesCS3D01G414400.1 Wheat plasma membrane 45.69 44.78
TraesCS3B01G454100.1 Wheat plasma membrane 45.69 44.63
TraesCS3B01G454000.1 Wheat plasma membrane 45.52 44.17
TraesCS3D01G414300.1 Wheat plasma membrane 45.35 44.15
TraesCS3A01G418700.1 Wheat plasma membrane 45.35 44.15
Bra010111.1-P Field mustard plasma membrane 45.01 43.46
TraesCS3A01G418800.1 Wheat plasma membrane 45.69 43.41
Bra025695.1-P Field mustard plasma membrane 42.3 43.1
Bra029248.1-P Field mustard plasma membrane 44.33 42.81
Bra033782.1-P Field mustard cytosol, peroxisome, plasma membrane 44.33 42.6
Bra031054.1-P Field mustard cytosol, peroxisome, plasma membrane 42.64 42.57
Bra019521.1-P Field mustard plasma membrane 43.82 42.39
Bra018096.1-P Field mustard cytosol, peroxisome, plasma membrane 43.99 42.28
Bra035885.1-P Field mustard peroxisome 38.58 40.43
Bra038366.1-P Field mustard plasma membrane 30.96 39.44
Bra009996.1-P Field mustard peroxisome 37.73 39.19
Bra020609.1-P Field mustard plasma membrane 37.9 39.16
Bra004320.1-P Field mustard cytosol, peroxisome, plasma membrane 38.75 38.68
KXG37624 Sorghum plasma membrane 38.75 37.85
Bra004030.1-P Field mustard cytosol, peroxisome, plasma membrane 38.07 37.75
Bra038367.1-P Field mustard cytosol, peroxisome, plasma membrane 38.41 37.58
Bra027185.1-P Field mustard plasma membrane 36.55 36.42
Os04t0660900-01 Rice plasma membrane, plastid 38.41 35.97
EES13016 Sorghum cytosol, nucleus, plasma membrane 38.75 35.84
Bra018952.1-P Field mustard plasma membrane 35.87 34.98
Zm00001d001976_P001 Maize plastid 38.58 34.03
Bra033955.1-P Field mustard plasma membrane 31.47 33.88
Bra021295.1-P Field mustard plasma membrane 31.47 33.39
Bra033884.1-P Field mustard plasma membrane 13.71 32.53
Bra033836.1-P Field mustard plasma membrane 26.73 30.27
Bra021168.1-P Field mustard plasma membrane 37.06 25.14
Bra016534.1-P Field mustard plastid 41.96 24.03
Bra038280.1-P Field mustard plasma membrane 28.43 15.04
Bra008953.1-P Field mustard plasma membrane 30.63 11.71
Protein Annotations
EnsemblPlants:Bra007886.1EnsemblPlants:Bra007886.1-PEnsemblPlantsGene:Bra007886GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085
InterPro:MFS_trans_sfInterPro:POT_famPANTHER:PTHR11654PANTHER:PTHR11654:SF20PFAM:PF00854SEG:seg
SUPFAM:SSF103473TMHMM:TMhelixUniParc:UPI000254687DUniProt:M4CUJ1MapMan:24.2.2.9:
Description
AT1G69870 (E=1e-275) | proton-dependent oligopeptide transport (POT) family protein
Coordinates
chrA02:+:11592371..11599083
Molecular Weight (calculated)
65337.8 Da
IEP (calculated)
8.650
GRAVY (calculated)
0.270
Length
591 amino acids
Sequence
(BLAST)
001: MDVSDSHSQK SSILDAEKVE KKPGGWRAVT FILGNETLER LGTIGLLSNF MVYLTRVFHL EQVDASNVIN IWSGFSNLTP LVGAFISDAY VGRFKTIAFA
101: SFATLLGLVT LTLTASLPQL HPETCNSKDP VSCGGPNKLQ FGILLLGLGF LSIGSGGIRP CSIPFGVDQF DQRTEEGIKG VASFFNWYYM TFTVVLLITQ
201: TVVVYIQDQV SWIIGFSVPT GLMACAVVMF FAGMKLYVYV KPEGSIFSGI AQVVVAARKK RKMKLPAEDD GTVTYYDPPV KDSVLSKLHH SNQYRFLDKA
301: AVIIEGDLSS EGVPANKWRL CSIQEVEEVK CLIRIVPVWS AGIISLAAMT QQGTFTVSQA LKMDRHIGPN FEIPAGSLSV ISLLTIGVFL PLYDRVLVPF
401: FRRITGHKSG ITLLQRIGTG IVFAILSMIV AGLVERMRRT RSINAGDSTG MTPMSVFWLS PQLILMGLCE AFNIIGQIEF FNSQFPEHMR SIANSLFSLS
501: FAGSNYLSSL IVTTVHKFSG GHDRPDWLNK NLNAGKLDYF YYLIAVLGVF NLVYFWYCAQ GYRYKVGLQM GGFEEDKSFS DVEMSSKKQL K
Best Arabidopsis Sequence Match ( AT1G69870.1 )
(BLAST)
001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
Arabidopsis Description
NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.