Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G414400.1 | Wheat | plasma membrane | 97.19 | 97.51 |
| HORVU3Hr1G092870.1 | Barley | plasma membrane | 96.53 | 96.37 |
| TraesCS3A01G418800.1 | Wheat | plasma membrane | 98.18 | 95.5 |
| TraesCS3B01G454000.1 | Wheat | plasma membrane | 83.31 | 82.76 |
| Os01t0913300-01 | Rice | plasma membrane | 79.34 | 80.0 |
| GSMUA_Achr7P01710_001 | Banana | cytosol, peroxisome, plasma membrane | 50.74 | 53.95 |
| GSMUA_Achr2P12500_001 | Banana | extracellular, mitochondrion, plasma membrane, plastid | 42.98 | 53.5 |
| GSMUA_Achr4P17590_001 | Banana | plasma membrane | 39.34 | 53.24 |
| VIT_01s0026g01490.t01 | Wine grape | plastid | 50.08 | 48.95 |
| PGSC0003DMT400045466 | Potato | cytosol, peroxisome, plasma membrane | 47.11 | 47.03 |
| CDY40280 | Canola | plasma membrane | 44.13 | 47.01 |
| Solyc05g006920.2.1 | Tomato | cytosol, peroxisome, plasma membrane | 47.11 | 46.95 |
| KRH69380 | Soybean | plastid | 48.76 | 46.9 |
| AT1G27080.1 | Thale cress | cytosol, golgi, plasma membrane | 44.63 | 46.88 |
| CDY25813 | Canola | cytosol, peroxisome, plasma membrane | 43.97 | 46.83 |
| Bra012429.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 43.97 | 46.83 |
| KRH74756 | Soybean | plastid | 47.77 | 46.61 |
| CDY28441 | Canola | cytosol, peroxisome, plasma membrane | 43.64 | 46.48 |
| Bra007886.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 44.63 | 45.69 |
| KRG99183 | Soybean | cytosol, peroxisome, plasma membrane, plastid | 46.94 | 45.66 |
| CDY56086 | Canola | cytosol, peroxisome, plasma membrane | 44.46 | 45.52 |
| CDY53067 | Canola | cytosol, peroxisome, plasma membrane | 44.63 | 45.45 |
| KRG99182 | Soybean | plasma membrane | 41.82 | 44.08 |
| CDY48389 | Canola | cytosol, peroxisome, plasma membrane | 44.13 | 43.99 |
| AT1G69870.1 | Thale cress | cytosol, nucleus, plasma membrane | 44.79 | 43.71 |
| CDY11647 | Canola | plastid | 44.63 | 43.62 |
| CDY38767 | Canola | plastid | 44.79 | 43.57 |
| Bra016259.1-P | Field mustard | plastid | 44.79 | 43.57 |
| CDY23545 | Canola | cytosol, peroxisome, plasma membrane | 43.64 | 43.49 |
| CDY38766 | Canola | plasma membrane | 39.34 | 43.19 |
| Bra016260.1-P | Field mustard | plasma membrane | 39.34 | 43.19 |
| AT1G69860.1 | Thale cress | plasma membrane | 39.5 | 43.06 |
| CDY11648 | Canola | plasma membrane | 39.17 | 43.01 |
| TraesCS4B01G029600.1 | Wheat | cytosol, peroxisome, plasma membrane | 41.82 | 42.52 |
| TraesCS2B01G057700.1 | Wheat | plasma membrane | 40.33 | 40.73 |
| TraesCS2B01G057600.1 | Wheat | cytosol, peroxisome, plasma membrane | 39.83 | 39.83 |
| TraesCS5B01G001100.1 | Wheat | cytosol, nucleus, plasma membrane | 39.5 | 39.37 |
| Bra003979.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 22.31 | 39.24 |
| TraesCS5B01G039100.1 | Wheat | cytosol, nucleus, plasma membrane | 39.01 | 38.19 |
| TraesCS1B01G267900.1 | Wheat | plasma membrane | 35.04 | 34.93 |
| TraesCS7B01G113600.2 | Wheat | cytosol, nucleus, peroxisome | 34.88 | 34.42 |
| TraesCS3B01G332100.1 | Wheat | plasma membrane | 33.22 | 34.18 |
| TraesCS1B01G268300.1 | Wheat | cytosol, nucleus, plasma membrane | 33.39 | 34.01 |
| TraesCS5B01G152000.1 | Wheat | plasma membrane | 30.41 | 32.34 |
| TraesCS1B01G268200.1 | Wheat | plasma membrane | 33.55 | 31.97 |
| TraesCS3B01G332000.1 | Wheat | plasma membrane | 30.74 | 31.74 |
| TraesCS7B01G020500.1 | Wheat | plasma membrane | 29.42 | 31.34 |
| TraesCS7B01G020300.1 | Wheat | plasma membrane | 28.93 | 29.41 |
| TraesCS7B01G020200.1 | Wheat | peroxisome, plasma membrane, vacuole | 16.03 | 25.0 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G454100.1 | EnsemblPlantsGene:TraesCS3B01G454100 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0022857 | GO:GO:0055085 | InterPro:IPR020846 | InterPro:MFS_dom |
| InterPro:MFS_trans_sf | InterPro:POT_fam | PANTHER:PTHR11654 | PANTHER:PTHR11654:SF20 | PFAM:PF00854 | SEG:seg |
| SUPFAM:SSF103473 | TIGR:cd06174 | TMHMM:TMhelix | MapMan:24.2.2.9 | : | : |
Description
No Description!
Coordinates
chr3B:+:695553592..695557395
Molecular Weight (calculated)
66455.4 Da
IEP (calculated)
8.441
GRAVY (calculated)
0.314
Length
605 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAEVEMGGG EALLEEGTGG TGARRGGRKP LGWRCMPFII ATETFEKVGS VGVAANLTVY LVNRYNIGKL AAANITNIFY GTLNFAPLLG AFISDAYLGR
101: FRTLAYGSFF SLLGMLGLTL SASVPALKPP GCSQTAQLGG HCNSPSTLQL SVLYISLAFL TIGGGAIRPC SLPFGVDQFD MTDEKSRKGL NSYYNWYYGT
201: TTAALVFSMT ILIYIQNSIS WPIGFGIPTF FMLMSIIILF MGTRLYVHVP PEGSIFTGIA QVLVASFKKR RLKLPHPDNI NQQELLLFSP PIGGHRIFRL
301: PLTSQFRCLN KGAIVRDGDI NDDGSARNSW ELCSIQQIEE VKCLLRIVPI CISGIICFVA LAQQFTYIIL QTLTMDCHLG THFEIPAGSV ISISLIALTA
401: FLPIYDRILV PIARRFTRVE SGITLLQRQG IGLVISPISM VVAGLVEHKR RNSALSNGGK SPMSVLWLAP QLILMGIAEA FNAVGQIEFY NKQFPEQMLT
501: LAGSLFFVTL AGANYLSTAL ANITRKVTTR DGHTSWLTDD INLGKLDYYF YFIALIGVLN FFYFLICSHY YQYKSMSLHA EESIKVHTKE EAEAEVDANT
601: DAPKK
101: FRTLAYGSFF SLLGMLGLTL SASVPALKPP GCSQTAQLGG HCNSPSTLQL SVLYISLAFL TIGGGAIRPC SLPFGVDQFD MTDEKSRKGL NSYYNWYYGT
201: TTAALVFSMT ILIYIQNSIS WPIGFGIPTF FMLMSIIILF MGTRLYVHVP PEGSIFTGIA QVLVASFKKR RLKLPHPDNI NQQELLLFSP PIGGHRIFRL
301: PLTSQFRCLN KGAIVRDGDI NDDGSARNSW ELCSIQQIEE VKCLLRIVPI CISGIICFVA LAQQFTYIIL QTLTMDCHLG THFEIPAGSV ISISLIALTA
401: FLPIYDRILV PIARRFTRVE SGITLLQRQG IGLVISPISM VVAGLVEHKR RNSALSNGGK SPMSVLWLAP QLILMGIAEA FNAVGQIEFY NKQFPEQMLT
501: LAGSLFFVTL AGANYLSTAL ANITRKVTTR DGHTSWLTDD INLGKLDYYF YFIALIGVLN FFYFLICSHY YQYKSMSLHA EESIKVHTKE EAEAEVDANT
601: DAPKK
001: MVLEDRKDGS SLPGRSGSFS KSSPSELDVV DPYKRISSPG SILDAEKVEK KPGGWRAVSF ILGNETLERL GSIGLLANFM VYLTKVFHLE QVDAANVINI
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
101: WSGFTNLTPL VGAYISDTYV GRFKTIAFAS FATLLGLITI TLTASFPQLH PASCNSQDPL SCGGPNKLQI GVLLLGLCFL SVGSGGIRPC SIPFGVDQFD
201: QRTEEGVKGV ASFFNWYYMT FTVVLIITQT VVVYIQDQVS WIIGFSIPTG LMALAVVMFF AGMKRYVYVK PEGSIFSGIA QVIVAARKKR KLKLPAEDDG
301: TVTYYDPAIK SSVLSKLHRS NQFRCLDKAA VVIEGDLTPE GPPADKWRLC SVQEVEEVKC LIRIVPIWSA GIISLAAMTT QGTFTVSQAL KMDRNLGPKF
401: EIPAGSLSVI SLLTIGIFLP FYDRVFVPFM RRITGHKSGI TLLQRIGTGI VFAIFSMIVA GIVERMRRIR SINAGDPTGM TPMSVFWLSP QLILMGLCEA
501: FNIIGQIEFF NSQFPEHMRS IANSLFSLSF AGSSYLSSFL VTVVHKFSGG HDRPDWLNKN LNAGKLDYFY YLIAVLGVVN LVYFWYCARG YRYKVGLPIE
601: DFEEDKSSDD VEMTSKKSMK
Arabidopsis Description
NPF2.13Protein NRT1/ PTR FAMILY 2.13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RX77]
SUBAcon: [plasma membrane,nucleus,cytosol]
SUBAcon: [plasma membrane,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.