Factsheet for TraesCS1B01G268300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G257200.1	Wheat	cytosol, nucleus, plasma membrane	97.98	97.98
TraesCS1A01G257900.1	Wheat	cytosol, nucleus, plasma membrane	97.47	97.47
HORVU1Hr1G063470.10	Barley	peroxisome	92.93	91.85
Os05t0410900-02	Rice	plasma membrane	84.01	83.44
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	80.3	79.63
Zm00001d038186_P002	Maize	cytosol, peroxisome, plasma membrane	79.97	79.56
GSMUA_Achr8P21720_001	Banana	nucleus	63.13	60.88
TraesCS1B01G267900.1	Wheat	plasma membrane	60.94	59.64
VIT_08s0040g00830.t01	Wine grape	peroxisome	57.41	56.93
KRH66698	Soybean	plasma membrane	50.0	55.51
TraesCS1B01G268200.1	Wheat	plasma membrane	57.74	54.02
KRH66693	Soybean	mitochondrion	55.22	53.77
KRG95048	Soybean	cytosol, nucleus, plasma membrane	55.05	53.61
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	53.87	52.03
PGSC0003DMT400065326	Potato	plasma membrane	52.19	50.74
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	26.43	49.84
TraesCS7B01G113600.2	Wheat	cytosol, nucleus, peroxisome	51.35	49.76
TraesCS4B01G029600.1	Wheat	cytosol, peroxisome, plasma membrane	36.36	36.3
TraesCS3B01G332000.1	Wheat	plasma membrane	35.35	35.84
TraesCS5B01G039100.1	Wheat	cytosol, nucleus, plasma membrane	36.7	35.28
TraesCS2B01G057600.1	Wheat	cytosol, peroxisome, plasma membrane	35.02	34.38
TraesCS5B01G001100.1	Wheat	cytosol, nucleus, plasma membrane	35.02	34.27
TraesCS2B01G057700.1	Wheat	plasma membrane	34.01	33.72
TraesCS5B01G152000.1	Wheat	plasma membrane	31.99	33.39
TraesCS3B01G454100.1	Wheat	plasma membrane	34.01	33.39
TraesCS3B01G332100.1	Wheat	plasma membrane	32.49	32.82
TraesCS3B01G454000.1	Wheat	plasma membrane	33.16	32.35
TraesCS7B01G020500.1	Wheat	plasma membrane	30.81	32.22
TraesCS7B01G020300.1	Wheat	plasma membrane	30.3	30.25
TraesCS7B01G020200.1	Wheat	peroxisome, plasma membrane, vacuole	17.0	26.03

Protein Annotations

EnsemblPlants:TraesCS1B01G268300.1	EnsemblPlantsGene:TraesCS1B01G268300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom
InterPro:MFS_trans_sf	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF196	PFAM:PF00854	SEG:seg
SUPFAM:SSF103473	TIGR:cd06174	TMHMM:TMhelix	MapMan:24.2.2.9	:	:

Description

No Description!

Coordinates

chr1B:-:471173622..471178044

Molecular Weight (calculated)

64875.1 Da

IEP (calculated)

9.586

GRAVY (calculated)

0.168

Length

594 amino acids

Sequence
(BLAST)

001: MAEDGRGRAE DAAEAAKKAK QGGFRTMPFI LANDFCDRLA TVGFGSNLIS YLTLQLHLPL VEASNVLTNY HGTTNLTPLV GGLIADSFAG RFWTITVGSI
101: IYQLGMVCLT LSAALPSLRP PPCANHAVEC QRASTYQIAI LYLSLLCTSI GSGGTRPCNM AFGADQLELG ARRRRSANGG KAPMWSFFNL YFFGIELAKL
201: TAVTVVVYIQ ENVGWGWGLG VPTIAMFVAV IGFVSGYSLY VKMPPGGSPL VRLAQVVAAA FKKRKTVLPD PDLLYEDKKL DAGISTTGRL LHTNQLKFLD
301: KAAIVTEGDV LPSGEPKLWR LSTVHRVEEI KSIVRMLPIW AAGILMVTAS SHNSSFAIQQ ARTMDRDITR SFKIPPASML IFTNLAMLIT LAFYDRVLVR
401: VLRRFTGRPN GITHLQRAGV GMTIAMLANV AAAAVETRRK SVAAASGMLD APKGATLPIS VFWLVPQYAI HGIADAFMDV GRMEFLYDQA PESMRSTAAA
501: LYWLTISAGS YLGTLLVTIV HEKTQASGQW LQDNLNRGKL DNYYWLVVGL QGLNLVYYFV CVKYYTFKPL ETEVEHQPGH GNGTESTKKG ESYK

Best Arabidopsis Sequence Match ( AT1G62200.1 )
(BLAST)

001: MVNSNEEDER RILDVEESLL TQEEVNNHLT GLSSTAEDGS IDIYGNPPSK KKTGNWKACP FILGNECCER LAYYGIAKNL ITYYTSELHE SNVSAASDVM
101: IWQGTCYITP LIGAVIADSY WGRYWTIASF SAIYFIGMAL LTLSASLPVL KPAACAGVAA ALCSPATTVQ YAVFFTGLYL IALGTGGIKP CVSSFGADQF
201: DDTDPRERVR KASFFNWFYF SINIGSFISS TLLVWVQENV GWGLGFLIPT VFMGVSIASF FIGTPLYRFQ KPGGSPITRV CQVLVAAYRK LKLNLPEDIS
301: FLYETREKNS MIAGSRKIQH TDGYKFLDKA AVISEYESKS GAFSNPWKLC TVTQVEEVKT LIRMFPIWAS GIVYSVLYSQ ISTLFVQQGR SMNRIIRSFE
401: IPPASFGVFD TLIVLISIPI YDRFLVPFVR RFTGIPKGLT DLQRMGIGLF LSVLSIAAAA IVETVRLQLA QDFVAMSIFW QIPQYILMGI AEVFFFIGRV
501: EFFYDESPDA MRSVCSALAL LNTAVGSYLS SLILTLVAYF TALGGKDGWV PDDLNKGHLD YFFWLLVSLG LVNIPVYALI CVKHTKKKAL

Arabidopsis Description

Major facilitator superfamily protein [Source:TAIR;Acc:AT1G62200]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.