Factsheet for Zm00001d038186_P002

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19524	Sorghum	cytosol, peroxisome, plasma membrane	94.97	94.66
TraesCS1D01G257200.1	Wheat	cytosol, nucleus, plasma membrane	79.9	80.3
TraesCS1A01G257900.1	Wheat	cytosol, nucleus, plasma membrane	79.9	80.3
TraesCS1B01G268300.1	Wheat	cytosol, nucleus, plasma membrane	79.56	79.97
Os05t0410900-02	Rice	plasma membrane	80.07	79.93
HORVU1Hr1G063470.10	Barley	peroxisome	76.88	76.37
GSMUA_Achr8P21720_001	Banana	nucleus	59.97	58.12
Zm00001d038179_P001	Maize	cytosol, nucleus, plasma membrane	29.15	57.43
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	30.15	57.32
Zm00001d038181_P001	Maize	plasma membrane	56.95	56.48
VIT_08s0040g00830.t01	Wine grape	peroxisome	55.95	55.76
Zm00001d038185_P001	Maize	plasma membrane	48.74	55.43
KRH66698	Soybean	plasma membrane	49.25	54.95
KRH66693	Soybean	mitochondrion	55.28	54.1
KRG95048	Soybean	cytosol, nucleus, plasma membrane	54.44	53.28
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	51.93	52.19
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	53.1	51.54
PGSC0003DMT400065326	Potato	plasma membrane	50.42	49.26
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	25.13	47.62
Zm00001d031213_P001	Maize	plasma membrane	33.17	38.9
Zm00001d013529_P002	Maize	plasma membrane	35.68	36.04
Zm00001d033528_P003	Maize	cytosol, peroxisome, plasma membrane	35.34	35.82
Zm00001d043374_P001	Maize	plasma membrane	31.66	31.87
Zm00001d043375_P001	Maize	plasma membrane	33.67	31.46
Zm00001d001976_P001	Maize	plastid	33.5	29.85
Zm00001d050456_P001	Maize	plasma membrane	23.45	27.4

Protein Annotations

EntrezGene:100281420	MapMan:24.2.2.9	ProteinID:AQK85949.1	UniProt:B4FQ14	EMBL:BT039202	EMBL:EU956649
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF196	SUPFAM:SSF103473	TMHMM:TMhelix
UniParc:UPI00017B78A4	EnsemblPlantsGene:Zm00001d038186	EnsemblPlants:Zm00001d038186_P002	EnsemblPlants:Zm00001d038186_T002	SEG:seg	:

Description

Protein NRT1/ PTR FAMILY 3.1

Coordinates

chr6:-:150861505..150866590

Molecular Weight (calculated)

65486.9 Da

IEP (calculated)

9.341

GRAVY (calculated)

0.198

Length

597 amino acids

Sequence
(BLAST)

001: MAEDARGEKK DAYAAAPASK LPAKQRGGFR SMPFILANDF CDRLASVGFT TNLISYLTLQ LHLPLVEASN IITNYNGTAN LTPLIGGLIA DSFAGRFWTI
101: TFGSIIYQLG MVCLTLSAAL PSLHPPSCAK HAADCQRASS YQISVLYLSL LCTSIGTGGT RPCTMAFGAD QLELNAHRHR GAKPKWSFFN LYFFAVELAK
201: LAAVTAVVYI QDNVGWSWGI GVPTVAMVAA VIAFVSGYSL YIRMPPGGSP LVRLAQVATA AYKKRKAVVP DPSLLYEDKE LDAGISTTGR LLHTDQLKCL
301: DKAAIVTDGD VLPSGQPKLW RLSTVHRIEE LKSIIRMLPI CAAGIILVTS ASHNHSFAIQ QARTMDRDIT PHFKIPPASM LIFTNFGMLL TLAFYDRVLV
401: RVLRRFTGRP NGITHLQRTG VGLTIAMLSN VVAAVVERRR KSVAAASGLL DAPKATLPMS VFWLVPQYAI HGIANAFMDV GRMEFLYDQA PESMRSSATA
501: LYWLTFSIGS YLGTLLVTIV HDKTKRTGQW LPDNLNRGKL DNYYWLVVAL EVVNLVYFFI CVKYYTFKPL EMVSGEEVEL YHHGNGTDDA KKQGVEA

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.