Factsheet for Zm00001d038185_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU78006	Sorghum	cytosol	92.76	81.03
Os05t0410800-01	Rice	cytosol, extracellular, mitochondrion	33.71	79.73
HORVU1Hr1G063460.2	Barley	plasma membrane	81.33	72.25
TraesCS1D01G257100.1	Wheat	plasma membrane	80.76	70.32
TraesCS1A01G257800.1	Wheat	cytosol, peroxisome, plasma membrane	80.95	70.25
TraesCS1B01G268200.1	Wheat	plasma membrane	81.52	67.4
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	38.29	64.01
Zm00001d038181_P001	Maize	plasma membrane	66.48	57.97
GSMUA_Achr8P21720_001	Banana	nucleus	63.62	54.22
Zm00001d038179_P001	Maize	cytosol, nucleus, plasma membrane	29.9	51.82
KRH66698	Soybean	plasma membrane	52.19	51.22
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	29.52	49.21
VIT_08s0040g00830.t01	Wine grape	peroxisome	55.62	48.75
Zm00001d038186_P002	Maize	cytosol, peroxisome, plasma membrane	55.43	48.74
KRH66693	Soybean	mitochondrion	53.71	46.23
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	52.0	45.96
KRG95048	Soybean	cytosol, nucleus, plasma membrane	53.33	45.9
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	52.76	45.04
PGSC0003DMT400065326	Potato	plasma membrane	51.62	44.35
Zm00001d031213_P001	Maize	plasma membrane	34.86	35.95
Zm00001d033528_P003	Maize	cytosol, peroxisome, plasma membrane	36.38	32.43
Zm00001d013529_P002	Maize	plasma membrane	36.38	32.32
Zm00001d050456_P001	Maize	plasma membrane	30.29	31.12
Zm00001d043375_P001	Maize	plasma membrane	36.0	29.58
Zm00001d043374_P001	Maize	plasma membrane	32.76	29.01
Zm00001d001976_P001	Maize	plastid	34.1	26.72

Protein Annotations

Gene3D:1.20.1250.20	MapMan:24.2.2.9	UniProt:A0A1D6M491	ProteinID:AQK85948.1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	InterPro:MFS_trans_sf	PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF168
SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI0008432DD7	EnsemblPlantsGene:Zm00001d038185	EnsemblPlants:Zm00001d038185_P001	EnsemblPlants:Zm00001d038185_T001
SEG:seg	:	:	:	:	:

Description

Protein NRT1/ PTR FAMILY 3.1

Coordinates

chr6:+:150859448..150861187

Molecular Weight (calculated)

56911.5 Da

IEP (calculated)

9.505

GRAVY (calculated)

0.394

Length

525 amino acids

Sequence
(BLAST)

001: MITYLTQQLH LPLVEASNLL TNFNGTAAFT PVLGAIIADS RAGRFWTIAG GGVLYQLGML GLVVSALVPA LRPASCGATG AAPPLTCQRA NGGQLAMLYG
101: SLLLTALGGG GIRPCVVAFG ADQFGQRGKR PGGEQQWSYF NLYFFSMGLA VLLALTVVVY IQENVGWGWG FGIPAIAMFV SVLSFVVGYP LYVKVKPQGS
201: PFKRLLQVVV AAFKKGKDSV PEDVGLLFLD RAAVLTTGDL SDSGEPNLWR VSTVHRVEEL KSIVRMLPLW AASITAIAAA SHNFTFAIQQ ARTMDRHLTP
301: RFQIPPATMI IFTTLTMLVS LALYDRVFVP VARRYTGRRS GGITYFQRMG AGFAVSVLGV LAGALVEARR RRVAAEHGLL DSPSAVVPVS VFWLVPQYAL
401: HGVSDALSTV GHMEFLYDQS PESMRSSAAA LFWVAGSLGN YLGTVLVTVV QSATRGVWLQ DNINKGRLDY YYWLVTFLLV LNLFYYIACF HFYTLKTFEV
501: DAGRTNGGER QPEAAEPCHV QVGSL

Best Arabidopsis Sequence Match ( AT1G68570.2 )
(BLAST)

001: MIYSANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF ASIIYQIGMT LLTISAIIPT LRPPPCKGEE
101: VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV
201: GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA IVTEEDNLKP GQIPNHWRLS TVHRVEELKS
301: VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA RKFTGLERGI TFLHRMGIGF VISIIATLVA
401: GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW MAISIGNYVS TLLVTLVHKF SAKPDGSNWL
501: PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.