Factsheet for Zm00001d038181_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19523	Sorghum	plasma membrane	87.87	87.15
Os05t0410500-01	Rice	cytosol, plasma membrane	76.74	79.79
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	41.2	78.98
TraesCS1D01G256700.1	Wheat	plasma membrane	79.24	78.45
TraesCS1B01G267900.1	Wheat	plasma membrane	78.9	78.25
TraesCS1A01G257400.1	Wheat	plasma membrane	78.74	77.7
HORVU1Hr1G063420.2	Barley	cytosol, nucleus, plasma membrane	77.41	77.28
Zm00001d038179_P001	Maize	cytosol, nucleus, plasma membrane	38.87	77.23
Zm00001d038185_P001	Maize	plasma membrane	57.97	66.48
GSMUA_Achr8P21720_001	Banana	nucleus	63.79	62.34
VIT_08s0040g00830.t01	Wine grape	peroxisome	58.47	58.76
Zm00001d038186_P002	Maize	cytosol, peroxisome, plasma membrane	56.48	56.95
KRH66698	Soybean	plasma membrane	49.34	55.51
KRG95048	Soybean	cytosol, nucleus, plasma membrane	54.65	53.93
KRH66693	Soybean	mitochondrion	54.49	53.77
Zm00001d045667_P001	Maize	cytosol, nucleus, peroxisome	52.82	53.54
PGSC0003DMT400065326	Potato	plasma membrane	52.82	52.05
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	52.82	51.71
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	26.41	50.48
Zm00001d031213_P001	Maize	plasma membrane	31.4	37.13
Zm00001d013529_P002	Maize	plasma membrane	35.05	35.7
Zm00001d033528_P003	Maize	cytosol, peroxisome, plasma membrane	34.88	35.65
Zm00001d043374_P001	Maize	plasma membrane	33.89	34.4
Zm00001d043375_P001	Maize	plasma membrane	35.88	33.8
Zm00001d001976_P001	Maize	plastid	35.88	32.24
Zm00001d050456_P001	Maize	plasma membrane	26.25	30.92

Protein Annotations

EntrezGene:100274435	MapMan:24.2.2.9	ProteinID:AQK85945.1	UniProt:B4FWH5	EMBL:BT041463	EMBL:BT043032
ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:MFS_trans_sf	PFAM:PF00854
InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF188	SUPFAM:SSF103473	TMHMM:TMhelix	UniParc:UPI00017B7A52
EnsemblPlantsGene:Zm00001d038181	EnsemblPlants:Zm00001d038181_P001	EnsemblPlants:Zm00001d038181_T001	SEG:seg	:	:

Description

Protein NRT1/ PTR FAMILY 3.1

Coordinates

chr6:-:150745127..150748423

Molecular Weight (calculated)

65498.6 Da

IEP (calculated)

8.510

GRAVY (calculated)

0.234

Length

602 amino acids

Sequence
(BLAST)

001: MGTATAAMDR NADGEQGKRK KKGGFRTMPL ILASEVCDRF ATAGFGANLI TYLTQQLHLP LVEASNTLTN FSGTSSLTPI LGAFAADAFA GRFWTIIAGS
101: VVYQLGMVGV VVSAVLPSLR PPPCDDPPAA TPCQRASGWQ LALLYLSLLL TSLGSGGIRP CVVAFGADQF ERLDSAEEEE KAKAKAEAER KRRYFNLYFF
201: TMGLAALLAL TVVVYIQENV GWGWGFGIPA VGMFMSIVVF LVGYPLYVLV KPGGSPFTRL AQVVAAAFKK RNAAVPEDPR MLYQDKELDA LISTNGRLLH
301: TNQLTFFDRA AIVTAGDISP SGQPDPWRLS TVHRVEELKS IVRMLPIWSA GIMLATASSH NYTFTIMQAR TMDRHMGPHF QLPPATLSIF SNAAMLVTLA
401: LYDRVFVPLA RRVTGLPSGI TYFQRMGIGL AISVLSVATA ALVETKRRDA AARHGLLDSP AAVVPLSVFW LVPQFAVHGV GDAFSSVGHM EFLYDQAPES
501: MRSSAAALFW LAASIGNYMG TVLVTAVQRA TRGRGEWLQD NINRGRIDNY YWLVTCITLL NLGYYLVCFY FYTMKPLEVA DDCDKDCELS SLQKNGSGAA
601: LV

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.