Factsheet for TraesCS1A01G257400.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

mitochondrion 2
cytosol 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, plasma membrane
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G256700.1	Wheat	plasma membrane	96.72	97.04
TraesCS1B01G267900.1	Wheat	plasma membrane	95.41	95.88
HORVU1Hr1G063420.2	Barley	cytosol, nucleus, plasma membrane	91.8	92.87
Os05t0410500-01	Rice	cytosol, plasma membrane	80.33	84.63
Zm00001d038181_P001	Maize	plasma membrane	77.7	78.74
Zm00001d038179_P001	Maize	cytosol, nucleus, plasma membrane	38.52	77.56
Zm00001d038180_P001	Maize	endoplasmic reticulum, plasma membrane, vacuole	39.67	77.07
EES19523	Sorghum	plasma membrane	76.39	76.77
EES18229	Sorghum	plastid	76.39	73.85
EES18230	Sorghum	cytosol	74.1	73.74
EER89657	Sorghum	cytosol, peroxisome, plasma membrane	69.34	70.62
TraesCS1A01G257800.1	Wheat	cytosol, peroxisome, plasma membrane	67.7	68.26
GSMUA_Achr8P21720_001	Banana	nucleus	64.43	63.8
TraesCS1A01G257900.1	Wheat	cytosol, nucleus, plasma membrane	60.0	61.62
VIT_08s0040g00830.t01	Wine grape	peroxisome	56.39	57.43
KRH66698	Soybean	plasma membrane	49.84	56.82
KRH66693	Soybean	mitochondrion	54.75	54.75
KRG95048	Soybean	cytosol, nucleus, plasma membrane	54.59	54.59
KRH66697	Soybean	cytosol, peroxisome, plasma membrane	53.93	53.5
TraesCS7A01G206400.1	Wheat	cytosol, nucleus, peroxisome	54.1	53.4
PGSC0003DMT400065326	Potato	plasma membrane	52.79	52.7
Solyc06g005070.1.1	Tomato	endoplasmic reticulum, plasma membrane, plastid	27.21	52.7
TraesCS5A01G037900.1	Wheat	cytosol, peroxisome, plasma membrane	35.9	35.55
TraesCS3A01G304500.1	Wheat	cytosol, peroxisome, plasma membrane	33.93	35.51
TraesCS4A01G283900.1	Wheat	golgi, unclear	34.43	35.18
TraesCS3A01G418700.1	Wheat	plasma membrane	34.92	35.09
TraesCS2A01G045500.1	Wheat	plasma membrane	34.1	34.72
TraesCS5A01G004400.1	Wheat	cytosol, nucleus, plasma membrane	34.59	34.48
TraesCS3A01G304400.1	Wheat	plasma membrane	33.11	34.35
TraesCS3A01G418800.1	Wheat	plasma membrane	34.92	34.24
TraesCS7A01G121700.1	Wheat	golgi, peroxisome, plasma membrane	31.31	33.57
TraesCS7A01G054100.1	Wheat	plasma membrane	29.84	32.44
TraesCS5A01G153200.1	Wheat	plasma membrane	30.82	32.19
TraesCS4A01G440300.1	Wheat	plasma membrane	29.02	32.12
TraesCS7A01G054000.2	Wheat	plasma membrane	28.69	31.76
TraesCS4A01G440700.1	Wheat	plasma membrane	29.02	31.66
TraesCS4A01G440500.1	Wheat	plasma membrane	28.52	31.58
TraesCS4A01G440600.1	Wheat	plasma membrane	28.36	31.4
TraesCS4A01G440400.1	Wheat	plasma membrane	28.36	31.4
TraesCS7A01G121600.1	Wheat	plastid	26.72	29.48

Protein Annotations

MapMan:24.2.2.9	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0022857	GO:GO:0055085	InterPro:IPR020846	InterPro:MFS_dom	InterPro:MFS_trans_sf
PFAM:PF00854	InterPro:POT_fam	PANTHER:PTHR11654	PANTHER:PTHR11654:SF188	SUPFAM:SSF103473	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS1A01G257400	EnsemblPlants:TraesCS1A01G257400.1	TIGR:cd06174	SEG:seg	:	:

Description

No Description!

Coordinates

chr1A:+:449623222..449625844

Molecular Weight (calculated)

65942.0 Da

IEP (calculated)

8.435

GRAVY (calculated)

0.205

Length

610 amino acids

Sequence
(BLAST)

001: MATTPPAGRD GAGGRKKRKQ GGFKTMPFIL VNEVCDRFAT AGFGANLITY LTQQLHLPLV EASNTLTNFG GTSSLTPILG ALAADSFAGR FWTIVAGSVF
101: YQLGMLGLVV SALLPSLRPR PCSPPAAPCR RANGLQLAVL YVSLLFTSLG SGGIRPCVVA FGADQFDPQE QEQDEEERRG VGGTDTEAVA GKKRQYFNLY
201: FFTMGFAVLL ALTVVVYIQE NVGWGWGFGI PAIGMLVSIV VFVVGYPLYV RLKPGGSPFT RLAQVVAAAY KKRRAPLPED PRMLYQDKEL DALISTNGRL
301: LHTNQLTFFD RAAIVTPGDA AGAGKVDLWR LSTVHRVEEL KSIVRMLPIW SAGILLVTAG SHNNSFTIQQ ARTMDRHVTQ HFQIPPATMS IFTTTAMLVT
401: LGLYDRAFVP LARRFTGLPA GITYFQRMAV GLAISILSVA TAALVEAKRR GAAADHGLLD APGAVVPMSV FWLVPQYAIH GVADGFSSVG HMEFLYDQAP
501: ESMRSTAAAL FWLSASLGSY MGTVLVTAVQ SATRGGGEWL QDNINRGRLD AYYWLVTCLM VLNLGYYLVC FHFYTMKPLE VAEDDGDHEK ECELSSVHKN
601: GDGGAAGGLV

Best Arabidopsis Sequence Match ( AT1G68570.1 )
(BLAST)

001: MEEQSKNKIS EEEKQLHGRP NRPKGGLITM PFIFANEICE KLAVVGFHAN MISYLTTQLH LPLTKAANTL TNFAGTSSLT PLLGAFIADS FAGRFWTITF
101: ASIIYQIGMT LLTISAIIPT LRPPPCKGEE VCVVADTAQL SILYVALLLG ALGSGGIRPC VVAFGADQFD ESDPNQTTKT WNYFNWYYFC MGAAVLLAVT
201: VLVWIQDNVG WGLGLGIPTV AMFLSVIAFV GGFQLYRHLV PAGSPFTRLI QVGVAAFRKR KLRMVSDPSL LYFNDEIDAP ISLGGKLTHT KHMSFLDKAA
301: IVTEEDNLKP GQIPNHWRLS TVHRVEELKS VIRMGPIGAS GILLITAYAQ QGTFSLQQAK TMNRHLTNSF QIPAGSMSVF TTVAMLTTII FYDRVFVKVA
401: RKFTGLERGI TFLHRMGIGF VISIIATLVA GFVEVKRKSV AIEHGLLDKP HTIVPISFLW LIPQYGLHGV AEAFMSIGHL EFFYDQAPES MRSTATALFW
501: MAISIGNYVS TLLVTLVHKF SAKPDGSNWL PDNNLNRGRL EYFYWLITVL QAVNLVYYLW CAKIYTYKPV QVHHSKEDSS PVKEELQLSN RSLVDE

Arabidopsis Description

NPF3.1Protein NRT1/ PTR FAMILY 3.1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SX20]
SUBAcon: [peroxisome,plasma membrane,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.